Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30178 | 90757;90758;90759 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
N2AB | 28537 | 85834;85835;85836 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
N2A | 27610 | 83053;83054;83055 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
N2B | 21113 | 63562;63563;63564 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
Novex-1 | 21238 | 63937;63938;63939 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
Novex-2 | 21305 | 64138;64139;64140 | chr2:178552368;178552367;178552366 | chr2:179417095;179417094;179417093 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.001 | N | 0.175 | 0.161 | 0.389750110748 | gnomAD-4.0.0 | 1.64371E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4485 | ambiguous | 0.4 | ambiguous | -2.041 | Highly Destabilizing | 0.296 | N | 0.481 | neutral | N | 0.4872534 | None | None | N |
V/C | 0.7507 | likely_pathogenic | 0.7405 | pathogenic | -1.578 | Destabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | N |
V/D | 0.8399 | likely_pathogenic | 0.829 | pathogenic | -2.59 | Highly Destabilizing | 0.957 | D | 0.672 | neutral | N | 0.500548716 | None | None | N |
V/E | 0.6793 | likely_pathogenic | 0.6758 | pathogenic | -2.352 | Highly Destabilizing | 0.906 | D | 0.588 | neutral | None | None | None | None | N |
V/F | 0.2706 | likely_benign | 0.2684 | benign | -1.221 | Destabilizing | 0.642 | D | 0.551 | neutral | N | 0.483744227 | None | None | N |
V/G | 0.5736 | likely_pathogenic | 0.5307 | ambiguous | -2.609 | Highly Destabilizing | 0.879 | D | 0.605 | neutral | N | 0.507928549 | None | None | N |
V/H | 0.8222 | likely_pathogenic | 0.8209 | pathogenic | -2.444 | Highly Destabilizing | 0.991 | D | 0.665 | neutral | None | None | None | None | N |
V/I | 0.0742 | likely_benign | 0.0756 | benign | -0.448 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.464583681 | None | None | N |
V/K | 0.7773 | likely_pathogenic | 0.7651 | pathogenic | -1.768 | Destabilizing | 0.906 | D | 0.581 | neutral | None | None | None | None | N |
V/L | 0.1661 | likely_benign | 0.1893 | benign | -0.448 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.506699662 | None | None | N |
V/M | 0.18 | likely_benign | 0.1916 | benign | -0.472 | Destabilizing | 0.826 | D | 0.551 | neutral | None | None | None | None | N |
V/N | 0.6873 | likely_pathogenic | 0.6753 | pathogenic | -2.112 | Highly Destabilizing | 0.967 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/P | 0.9503 | likely_pathogenic | 0.944 | pathogenic | -0.951 | Destabilizing | 0.967 | D | 0.629 | neutral | None | None | None | None | N |
V/Q | 0.6277 | likely_pathogenic | 0.622 | pathogenic | -1.908 | Destabilizing | 0.967 | D | 0.63 | neutral | None | None | None | None | N |
V/R | 0.7162 | likely_pathogenic | 0.6964 | pathogenic | -1.668 | Destabilizing | 0.906 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/S | 0.5347 | ambiguous | 0.4968 | ambiguous | -2.751 | Highly Destabilizing | 0.906 | D | 0.559 | neutral | None | None | None | None | N |
V/T | 0.3483 | ambiguous | 0.3437 | ambiguous | -2.357 | Highly Destabilizing | 0.575 | D | 0.493 | neutral | None | None | None | None | N |
V/W | 0.898 | likely_pathogenic | 0.8962 | pathogenic | -1.784 | Destabilizing | 0.991 | D | 0.684 | prob.neutral | None | None | None | None | N |
V/Y | 0.7004 | likely_pathogenic | 0.6841 | pathogenic | -1.37 | Destabilizing | 0.906 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.