Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30188 | 90787;90788;90789 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
N2AB | 28547 | 85864;85865;85866 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
N2A | 27620 | 83083;83084;83085 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
N2B | 21123 | 63592;63593;63594 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
Novex-1 | 21248 | 63967;63968;63969 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
Novex-2 | 21315 | 64168;64169;64170 | chr2:178552338;178552337;178552336 | chr2:179417065;179417064;179417063 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1456715081 | None | 0.004 | N | 0.365 | 0.201 | 0.349647731962 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1456715081 | None | 0.004 | N | 0.365 | 0.201 | 0.349647731962 | gnomAD-4.0.0 | 2.49705E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.23464E-05 | None | 0 | 0 | 1.70194E-06 | 1.13327E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0905 | likely_benign | 0.0866 | benign | -1.023 | Destabilizing | 0.007 | N | 0.149 | neutral | N | 0.515284647 | None | None | N |
T/C | 0.3024 | likely_benign | 0.2933 | benign | -0.852 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | N |
T/D | 0.6259 | likely_pathogenic | 0.5898 | pathogenic | -1.744 | Destabilizing | 0.617 | D | 0.515 | neutral | None | None | None | None | N |
T/E | 0.5351 | ambiguous | 0.4853 | ambiguous | -1.543 | Destabilizing | 0.617 | D | 0.494 | neutral | None | None | None | None | N |
T/F | 0.2212 | likely_benign | 0.2204 | benign | -0.639 | Destabilizing | 0.85 | D | 0.632 | neutral | None | None | None | None | N |
T/G | 0.2523 | likely_benign | 0.2366 | benign | -1.45 | Destabilizing | 0.25 | N | 0.533 | neutral | None | None | None | None | N |
T/H | 0.2696 | likely_benign | 0.2664 | benign | -1.676 | Destabilizing | 0.992 | D | 0.624 | neutral | None | None | None | None | N |
T/I | 0.1559 | likely_benign | 0.1408 | benign | 0.095 | Stabilizing | 0.004 | N | 0.365 | neutral | N | 0.512823132 | None | None | N |
T/K | 0.3482 | ambiguous | 0.2978 | benign | -0.683 | Destabilizing | 0.617 | D | 0.495 | neutral | None | None | None | None | N |
T/L | 0.1113 | likely_benign | 0.1066 | benign | 0.095 | Stabilizing | 0.103 | N | 0.489 | neutral | None | None | None | None | N |
T/M | 0.0991 | likely_benign | 0.0951 | benign | 0.087 | Stabilizing | 0.85 | D | 0.582 | neutral | None | None | None | None | N |
T/N | 0.1627 | likely_benign | 0.151 | benign | -1.435 | Destabilizing | 0.549 | D | 0.533 | neutral | N | 0.495081441 | None | None | N |
T/P | 0.7201 | likely_pathogenic | 0.7308 | pathogenic | -0.245 | Destabilizing | 0.896 | D | 0.557 | neutral | D | 0.53007541 | None | None | N |
T/Q | 0.2954 | likely_benign | 0.2807 | benign | -1.173 | Destabilizing | 0.92 | D | 0.575 | neutral | None | None | None | None | N |
T/R | 0.2851 | likely_benign | 0.2534 | benign | -0.932 | Destabilizing | 0.85 | D | 0.567 | neutral | None | None | None | None | N |
T/S | 0.1054 | likely_benign | 0.1021 | benign | -1.572 | Destabilizing | 0.007 | N | 0.169 | neutral | N | 0.493714509 | None | None | N |
T/V | 0.134 | likely_benign | 0.1232 | benign | -0.245 | Destabilizing | 0.103 | N | 0.496 | neutral | None | None | None | None | N |
T/W | 0.613 | likely_pathogenic | 0.611 | pathogenic | -0.881 | Destabilizing | 0.992 | D | 0.651 | neutral | None | None | None | None | N |
T/Y | 0.2594 | likely_benign | 0.26 | benign | -0.481 | Destabilizing | 0.92 | D | 0.643 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.