Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30205 | 90838;90839;90840 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
N2AB | 28564 | 85915;85916;85917 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
N2A | 27637 | 83134;83135;83136 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
N2B | 21140 | 63643;63644;63645 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
Novex-1 | 21265 | 64018;64019;64020 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
Novex-2 | 21332 | 64219;64220;64221 | chr2:178552287;178552286;178552285 | chr2:179417014;179417013;179417012 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | rs1283032526 | -1.9 | 0.998 | D | 0.811 | 0.521 | 0.838418281918 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
I/N | rs1283032526 | -1.9 | 0.998 | D | 0.811 | 0.521 | 0.838418281918 | gnomAD-4.0.0 | 3.18458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.7187E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6384 | likely_pathogenic | 0.4648 | ambiguous | -2.35 | Highly Destabilizing | 0.931 | D | 0.661 | neutral | None | None | None | None | N |
I/C | 0.7884 | likely_pathogenic | 0.6742 | pathogenic | -1.599 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/D | 0.9444 | likely_pathogenic | 0.8762 | pathogenic | -2.729 | Highly Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
I/E | 0.843 | likely_pathogenic | 0.72 | pathogenic | -2.545 | Highly Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
I/F | 0.2695 | likely_benign | 0.1861 | benign | -1.382 | Destabilizing | 0.994 | D | 0.596 | neutral | N | 0.510105327 | None | None | N |
I/G | 0.9076 | likely_pathogenic | 0.8091 | pathogenic | -2.829 | Highly Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
I/H | 0.7328 | likely_pathogenic | 0.572 | pathogenic | -2.33 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
I/K | 0.7406 | likely_pathogenic | 0.5732 | pathogenic | -1.705 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
I/L | 0.165 | likely_benign | 0.1296 | benign | -0.983 | Destabilizing | 0.689 | D | 0.378 | neutral | N | 0.472240372 | None | None | N |
I/M | 0.1651 | likely_benign | 0.1255 | benign | -1.001 | Destabilizing | 0.994 | D | 0.614 | neutral | N | 0.495559949 | None | None | N |
I/N | 0.5542 | ambiguous | 0.3729 | ambiguous | -1.945 | Destabilizing | 0.998 | D | 0.811 | deleterious | D | 0.524322631 | None | None | N |
I/P | 0.9872 | likely_pathogenic | 0.9777 | pathogenic | -1.419 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
I/Q | 0.6912 | likely_pathogenic | 0.5432 | ambiguous | -1.872 | Destabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
I/R | 0.657 | likely_pathogenic | 0.4935 | ambiguous | -1.39 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
I/S | 0.5385 | ambiguous | 0.3629 | ambiguous | -2.56 | Highly Destabilizing | 0.994 | D | 0.765 | deleterious | N | 0.471720297 | None | None | N |
I/T | 0.3563 | ambiguous | 0.2074 | benign | -2.252 | Highly Destabilizing | 0.961 | D | 0.663 | neutral | N | 0.411690558 | None | None | N |
I/V | 0.1145 | likely_benign | 0.0875 | benign | -1.419 | Destabilizing | 0.122 | N | 0.247 | neutral | N | 0.419501965 | None | None | N |
I/W | 0.9112 | likely_pathogenic | 0.8469 | pathogenic | -1.782 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
I/Y | 0.6816 | likely_pathogenic | 0.5256 | ambiguous | -1.493 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.