Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3022 | 9289;9290;9291 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
N2AB | 3022 | 9289;9290;9291 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
N2A | 3022 | 9289;9290;9291 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
N2B | 2976 | 9151;9152;9153 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
Novex-1 | 2976 | 9151;9152;9153 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
Novex-2 | 2976 | 9151;9152;9153 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
Novex-3 | 3022 | 9289;9290;9291 | chr2:178768772;178768771;178768770 | chr2:179633499;179633498;179633497 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.991 | N | 0.803 | 0.684 | 0.570301176191 | gnomAD-4.0.0 | 1.36817E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79859E-06 | 0 | 0 |
T/P | None | None | 0.991 | D | 0.803 | 0.636 | 0.578230335649 | gnomAD-4.0.0 | 3.60396E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.94085E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1692 | likely_benign | 0.1671 | benign | -0.813 | Destabilizing | 0.76 | D | 0.466 | neutral | N | 0.511832111 | None | None | N |
T/C | 0.5235 | ambiguous | 0.5721 | pathogenic | -0.646 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
T/D | 0.7682 | likely_pathogenic | 0.7889 | pathogenic | -1.156 | Destabilizing | 0.986 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/E | 0.6023 | likely_pathogenic | 0.5774 | pathogenic | -1.095 | Destabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/F | 0.4036 | ambiguous | 0.3806 | ambiguous | -0.714 | Destabilizing | 0.998 | D | 0.798 | deleterious | None | None | None | None | N |
T/G | 0.5485 | ambiguous | 0.5697 | pathogenic | -1.132 | Destabilizing | 0.91 | D | 0.64 | neutral | None | None | None | None | N |
T/H | 0.3314 | likely_benign | 0.3441 | ambiguous | -1.504 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
T/I | 0.2332 | likely_benign | 0.2103 | benign | -0.035 | Destabilizing | 0.991 | D | 0.803 | deleterious | N | 0.505669359 | None | None | N |
T/K | 0.3568 | ambiguous | 0.3213 | benign | -0.901 | Destabilizing | 0.982 | D | 0.725 | prob.delet. | N | 0.468278652 | None | None | N |
T/L | 0.1946 | likely_benign | 0.1524 | benign | -0.035 | Destabilizing | 0.953 | D | 0.618 | neutral | None | None | None | None | N |
T/M | 0.1248 | likely_benign | 0.0976 | benign | 0.228 | Stabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
T/N | 0.2302 | likely_benign | 0.2562 | benign | -1.122 | Destabilizing | 0.986 | D | 0.645 | neutral | None | None | None | None | N |
T/P | 0.8484 | likely_pathogenic | 0.8225 | pathogenic | -0.261 | Destabilizing | 0.991 | D | 0.803 | deleterious | D | 0.584377734 | None | None | N |
T/Q | 0.3071 | likely_benign | 0.2668 | benign | -1.202 | Destabilizing | 0.993 | D | 0.803 | deleterious | None | None | None | None | N |
T/R | 0.293 | likely_benign | 0.2604 | benign | -0.783 | Destabilizing | 0.982 | D | 0.808 | deleterious | N | 0.509482545 | None | None | N |
T/S | 0.1579 | likely_benign | 0.1849 | benign | -1.262 | Destabilizing | 0.17 | N | 0.219 | neutral | N | 0.496511205 | None | None | N |
T/V | 0.1892 | likely_benign | 0.168 | benign | -0.261 | Destabilizing | 0.953 | D | 0.524 | neutral | None | None | None | None | N |
T/W | 0.7838 | likely_pathogenic | 0.7583 | pathogenic | -0.769 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
T/Y | 0.4566 | ambiguous | 0.4687 | ambiguous | -0.479 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.