Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30250 | 90973;90974;90975 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
N2AB | 28609 | 86050;86051;86052 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
N2A | 27682 | 83269;83270;83271 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
N2B | 21185 | 63778;63779;63780 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
Novex-1 | 21310 | 64153;64154;64155 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
Novex-2 | 21377 | 64354;64355;64356 | chr2:178552152;178552151;178552150 | chr2:179416879;179416878;179416877 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs776305858 | 0.078 | 0.052 | N | 0.351 | 0.204 | 0.308278614506 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/A | rs776305858 | 0.078 | 0.052 | N | 0.351 | 0.204 | 0.308278614506 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
E/A | rs776305858 | 0.078 | 0.052 | N | 0.351 | 0.204 | 0.308278614506 | gnomAD-4.0.0 | 2.56219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.68075E-05 | 0 |
E/K | rs200651247 | 0.716 | 0.001 | N | 0.129 | 0.202 | None | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | N | None | 8.27E-05 | 8.49E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
E/K | rs200651247 | 0.716 | 0.001 | N | 0.129 | 0.202 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
E/K | rs200651247 | 0.716 | 0.001 | N | 0.129 | 0.202 | None | gnomAD-4.0.0 | 1.12163E-04 | None | None | None | None | N | None | 1.33476E-05 | 6.67022E-05 | None | 0 | 0 | None | 0 | 0 | 1.4409E-04 | 0 | 9.60584E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1177 | likely_benign | 0.1235 | benign | -0.049 | Destabilizing | 0.052 | N | 0.351 | neutral | N | 0.430977247 | None | None | N |
E/C | 0.6957 | likely_pathogenic | 0.7399 | pathogenic | -0.086 | Destabilizing | 0.935 | D | 0.398 | neutral | None | None | None | None | N |
E/D | 0.0818 | likely_benign | 0.088 | benign | -0.275 | Destabilizing | None | N | 0.14 | neutral | N | 0.479077839 | None | None | N |
E/F | 0.6271 | likely_pathogenic | 0.6829 | pathogenic | -0.087 | Destabilizing | 0.791 | D | 0.362 | neutral | None | None | None | None | N |
E/G | 0.1645 | likely_benign | 0.1669 | benign | -0.173 | Destabilizing | 0.117 | N | 0.446 | neutral | N | 0.494124649 | None | None | N |
E/H | 0.3679 | ambiguous | 0.3969 | ambiguous | 0.425 | Stabilizing | 0.555 | D | 0.317 | neutral | None | None | None | None | N |
E/I | 0.2277 | likely_benign | 0.2378 | benign | 0.219 | Stabilizing | 0.555 | D | 0.389 | neutral | None | None | None | None | N |
E/K | 0.1403 | likely_benign | 0.1377 | benign | 0.465 | Stabilizing | 0.001 | N | 0.129 | neutral | N | 0.419778819 | None | None | N |
E/L | 0.2568 | likely_benign | 0.2768 | benign | 0.219 | Stabilizing | 0.149 | N | 0.4 | neutral | None | None | None | None | N |
E/M | 0.3487 | ambiguous | 0.3684 | ambiguous | 0.069 | Stabilizing | 0.935 | D | 0.366 | neutral | None | None | None | None | N |
E/N | 0.1736 | likely_benign | 0.1945 | benign | 0.227 | Stabilizing | 0.081 | N | 0.332 | neutral | None | None | None | None | N |
E/P | 0.5065 | ambiguous | 0.5379 | ambiguous | 0.148 | Stabilizing | 0.555 | D | 0.345 | neutral | None | None | None | None | N |
E/Q | 0.1378 | likely_benign | 0.1465 | benign | 0.24 | Stabilizing | 0.005 | N | 0.21 | neutral | N | 0.468015483 | None | None | N |
E/R | 0.2348 | likely_benign | 0.2422 | benign | 0.653 | Stabilizing | 0.081 | N | 0.333 | neutral | None | None | None | None | N |
E/S | 0.1426 | likely_benign | 0.1611 | benign | 0.092 | Stabilizing | 0.081 | N | 0.304 | neutral | None | None | None | None | N |
E/T | 0.1585 | likely_benign | 0.1718 | benign | 0.2 | Stabilizing | 0.149 | N | 0.411 | neutral | None | None | None | None | N |
E/V | 0.145 | likely_benign | 0.1528 | benign | 0.148 | Stabilizing | 0.211 | N | 0.419 | neutral | N | 0.489641549 | None | None | N |
E/W | 0.7928 | likely_pathogenic | 0.8323 | pathogenic | -0.035 | Destabilizing | 0.935 | D | 0.465 | neutral | None | None | None | None | N |
E/Y | 0.4729 | ambiguous | 0.5333 | ambiguous | 0.138 | Stabilizing | 0.791 | D | 0.378 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.