Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30294 | 91105;91106;91107 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
N2AB | 28653 | 86182;86183;86184 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
N2A | 27726 | 83401;83402;83403 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
N2B | 21229 | 63910;63911;63912 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
Novex-1 | 21354 | 64285;64286;64287 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
Novex-2 | 21421 | 64486;64487;64488 | chr2:178552020;178552019;178552018 | chr2:179416747;179416746;179416745 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.989 | N | 0.573 | 0.559 | 0.469333501611 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86157E-06 | 0 | 0 |
E/D | None | None | 0.989 | N | 0.43 | 0.219 | 0.240491677333 | gnomAD-4.0.0 | 2.05356E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2061 | likely_benign | 0.1762 | benign | -0.918 | Destabilizing | 0.989 | D | 0.573 | neutral | N | 0.490348867 | None | None | N |
E/C | 0.8958 | likely_pathogenic | 0.897 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
E/D | 0.3177 | likely_benign | 0.2966 | benign | -0.925 | Destabilizing | 0.989 | D | 0.43 | neutral | N | 0.468116782 | None | None | N |
E/F | 0.8945 | likely_pathogenic | 0.8834 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/G | 0.3621 | ambiguous | 0.3063 | benign | -1.299 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | N | 0.48929891 | None | None | N |
E/H | 0.7195 | likely_pathogenic | 0.6722 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/I | 0.4804 | ambiguous | 0.4702 | ambiguous | 0.131 | Stabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/K | 0.2871 | likely_benign | 0.2226 | benign | -0.355 | Destabilizing | 0.978 | D | 0.48 | neutral | N | 0.478939655 | None | None | N |
E/L | 0.5675 | likely_pathogenic | 0.5229 | ambiguous | 0.131 | Stabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | N |
E/M | 0.6017 | likely_pathogenic | 0.5723 | pathogenic | 0.533 | Stabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
E/N | 0.4816 | ambiguous | 0.4366 | ambiguous | -0.973 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/P | 0.5661 | likely_pathogenic | 0.5302 | ambiguous | -0.198 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/Q | 0.1854 | likely_benign | 0.1629 | benign | -0.831 | Destabilizing | 0.775 | D | 0.299 | neutral | N | 0.503762852 | None | None | N |
E/R | 0.4755 | ambiguous | 0.4002 | ambiguous | -0.032 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/S | 0.3152 | likely_benign | 0.2696 | benign | -1.302 | Destabilizing | 0.992 | D | 0.535 | neutral | None | None | None | None | N |
E/T | 0.3264 | likely_benign | 0.2977 | benign | -0.971 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
E/V | 0.2951 | likely_benign | 0.2844 | benign | -0.198 | Destabilizing | 0.998 | D | 0.761 | deleterious | N | 0.484450291 | None | None | N |
E/W | 0.9741 | likely_pathogenic | 0.97 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/Y | 0.8383 | likely_pathogenic | 0.8136 | pathogenic | 0.166 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.