Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30304 | 91135;91136;91137 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
N2AB | 28663 | 86212;86213;86214 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
N2A | 27736 | 83431;83432;83433 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
N2B | 21239 | 63940;63941;63942 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
Novex-1 | 21364 | 64315;64316;64317 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
Novex-2 | 21431 | 64516;64517;64518 | chr2:178551990;178551989;178551988 | chr2:179416717;179416716;179416715 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.98 | N | 0.587 | 0.299 | 0.534668972696 | gnomAD-4.0.0 | 3.19291E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87181E-06 | 1.43468E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8067 | likely_pathogenic | 0.7944 | pathogenic | -0.047 | Destabilizing | 0.931 | D | 0.51 | neutral | None | None | None | None | I |
R/C | 0.4691 | ambiguous | 0.4974 | ambiguous | -0.224 | Destabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | I |
R/D | 0.9526 | likely_pathogenic | 0.9506 | pathogenic | -0.12 | Destabilizing | 0.996 | D | 0.533 | neutral | None | None | None | None | I |
R/E | 0.8278 | likely_pathogenic | 0.8171 | pathogenic | -0.049 | Destabilizing | 0.97 | D | 0.456 | neutral | None | None | None | None | I |
R/F | 0.9079 | likely_pathogenic | 0.9048 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
R/G | 0.7813 | likely_pathogenic | 0.7597 | pathogenic | -0.237 | Destabilizing | 0.98 | D | 0.587 | neutral | N | 0.480791944 | None | None | I |
R/H | 0.3128 | likely_benign | 0.3189 | benign | -0.879 | Destabilizing | 0.999 | D | 0.449 | neutral | None | None | None | None | I |
R/I | 0.6039 | likely_pathogenic | 0.5503 | ambiguous | 0.417 | Stabilizing | 0.998 | D | 0.586 | neutral | N | 0.516614719 | None | None | I |
R/K | 0.219 | likely_benign | 0.184 | benign | -0.112 | Destabilizing | 0.122 | N | 0.19 | neutral | N | 0.477613614 | None | None | I |
R/L | 0.6258 | likely_pathogenic | 0.5954 | pathogenic | 0.417 | Stabilizing | 0.985 | D | 0.587 | neutral | None | None | None | None | I |
R/M | 0.7159 | likely_pathogenic | 0.6613 | pathogenic | -0.069 | Destabilizing | 1.0 | D | 0.528 | neutral | None | None | None | None | I |
R/N | 0.9073 | likely_pathogenic | 0.8948 | pathogenic | 0.033 | Stabilizing | 0.985 | D | 0.497 | neutral | None | None | None | None | I |
R/P | 0.8361 | likely_pathogenic | 0.8465 | pathogenic | 0.283 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
R/Q | 0.2747 | likely_benign | 0.2793 | benign | -0.012 | Destabilizing | 0.97 | D | 0.521 | neutral | None | None | None | None | I |
R/S | 0.8765 | likely_pathogenic | 0.8759 | pathogenic | -0.268 | Destabilizing | 0.961 | D | 0.577 | neutral | N | 0.505434934 | None | None | I |
R/T | 0.7207 | likely_pathogenic | 0.6628 | pathogenic | -0.059 | Destabilizing | 0.98 | D | 0.593 | neutral | N | 0.468517948 | None | None | I |
R/V | 0.7195 | likely_pathogenic | 0.6961 | pathogenic | 0.283 | Stabilizing | 0.996 | D | 0.549 | neutral | None | None | None | None | I |
R/W | 0.5746 | likely_pathogenic | 0.5723 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
R/Y | 0.782 | likely_pathogenic | 0.7919 | pathogenic | 0.017 | Stabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.