Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30361 | 91306;91307;91308 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
N2AB | 28720 | 86383;86384;86385 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
N2A | 27793 | 83602;83603;83604 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
N2B | 21296 | 64111;64112;64113 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
Novex-1 | 21421 | 64486;64487;64488 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
Novex-2 | 21488 | 64687;64688;64689 | chr2:178551819;178551818;178551817 | chr2:179416546;179416545;179416544 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1237357912 | -2.958 | 0.996 | D | 0.593 | 0.578 | 0.699720955005 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.3925E-04 | 0 | 0 |
V/A | rs1237357912 | -2.958 | 0.996 | D | 0.593 | 0.578 | 0.699720955005 | gnomAD-4.0.0 | 3.18228E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.76492E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.612 | likely_pathogenic | 0.6177 | pathogenic | -2.465 | Highly Destabilizing | 0.996 | D | 0.593 | neutral | D | 0.54707312 | None | None | N |
V/C | 0.8994 | likely_pathogenic | 0.907 | pathogenic | -1.642 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9982 | likely_pathogenic | 0.9979 | pathogenic | -3.315 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.547833589 | None | None | N |
V/E | 0.9923 | likely_pathogenic | 0.991 | pathogenic | -3.005 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
V/F | 0.7208 | likely_pathogenic | 0.7319 | pathogenic | -1.429 | Destabilizing | 0.998 | D | 0.821 | deleterious | D | 0.547580099 | None | None | N |
V/G | 0.8956 | likely_pathogenic | 0.8898 | pathogenic | -3.015 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.547833589 | None | None | N |
V/H | 0.997 | likely_pathogenic | 0.9968 | pathogenic | -2.849 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
V/I | 0.0716 | likely_benign | 0.0722 | benign | -0.83 | Destabilizing | 0.962 | D | 0.561 | neutral | N | 0.443218613 | None | None | N |
V/K | 0.9939 | likely_pathogenic | 0.993 | pathogenic | -2.007 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/L | 0.2206 | likely_benign | 0.2265 | benign | -0.83 | Destabilizing | 0.275 | N | 0.314 | neutral | N | 0.494247653 | None | None | N |
V/M | 0.3481 | ambiguous | 0.3549 | ambiguous | -1.101 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
V/N | 0.992 | likely_pathogenic | 0.9909 | pathogenic | -2.762 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
V/P | 0.991 | likely_pathogenic | 0.9874 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
V/Q | 0.989 | likely_pathogenic | 0.9873 | pathogenic | -2.375 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/R | 0.9883 | likely_pathogenic | 0.9867 | pathogenic | -2.162 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
V/S | 0.9447 | likely_pathogenic | 0.9409 | pathogenic | -3.128 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
V/T | 0.7687 | likely_pathogenic | 0.7598 | pathogenic | -2.673 | Highly Destabilizing | 0.997 | D | 0.63 | neutral | None | None | None | None | N |
V/W | 0.9937 | likely_pathogenic | 0.9942 | pathogenic | -1.849 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
V/Y | 0.9799 | likely_pathogenic | 0.9791 | pathogenic | -1.673 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.