Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30368 | 91327;91328;91329 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
N2AB | 28727 | 86404;86405;86406 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
N2A | 27800 | 83623;83624;83625 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
N2B | 21303 | 64132;64133;64134 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
Novex-1 | 21428 | 64507;64508;64509 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
Novex-2 | 21495 | 64708;64709;64710 | chr2:178551798;178551797;178551796 | chr2:179416525;179416524;179416523 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1377525148 | -0.219 | 1.0 | N | 0.573 | 0.548 | 0.40318662893 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
S/R | rs1377525148 | -0.219 | 1.0 | N | 0.573 | 0.548 | 0.40318662893 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1502 | likely_benign | 0.1746 | benign | -0.357 | Destabilizing | 0.998 | D | 0.396 | neutral | None | None | None | None | N |
S/C | 0.2405 | likely_benign | 0.2589 | benign | -0.373 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.50684696 | None | None | N |
S/D | 0.9417 | likely_pathogenic | 0.9349 | pathogenic | 0.21 | Stabilizing | 0.999 | D | 0.476 | neutral | None | None | None | None | N |
S/E | 0.9636 | likely_pathogenic | 0.9642 | pathogenic | 0.129 | Stabilizing | 0.999 | D | 0.459 | neutral | None | None | None | None | N |
S/F | 0.7986 | likely_pathogenic | 0.8352 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
S/G | 0.1776 | likely_benign | 0.1795 | benign | -0.492 | Destabilizing | 0.999 | D | 0.375 | neutral | N | 0.512976982 | None | None | N |
S/H | 0.8486 | likely_pathogenic | 0.8559 | pathogenic | -0.922 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/I | 0.8108 | likely_pathogenic | 0.8353 | pathogenic | -0.131 | Destabilizing | 1.0 | D | 0.626 | neutral | D | 0.529470666 | None | None | N |
S/K | 0.9826 | likely_pathogenic | 0.9857 | pathogenic | -0.561 | Destabilizing | 0.999 | D | 0.466 | neutral | None | None | None | None | N |
S/L | 0.3489 | ambiguous | 0.3998 | ambiguous | -0.131 | Destabilizing | 1.0 | D | 0.545 | neutral | None | None | None | None | N |
S/M | 0.5307 | ambiguous | 0.578 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
S/N | 0.5326 | ambiguous | 0.529 | ambiguous | -0.318 | Destabilizing | 0.999 | D | 0.459 | neutral | N | 0.515518641 | None | None | N |
S/P | 0.9895 | likely_pathogenic | 0.9892 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.577 | neutral | None | None | None | None | N |
S/Q | 0.902 | likely_pathogenic | 0.9123 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
S/R | 0.9643 | likely_pathogenic | 0.973 | pathogenic | -0.346 | Destabilizing | 1.0 | D | 0.573 | neutral | N | 0.481207834 | None | None | N |
S/T | 0.1931 | likely_benign | 0.2077 | benign | -0.42 | Destabilizing | 0.999 | D | 0.359 | neutral | N | 0.484118299 | None | None | N |
S/V | 0.6896 | likely_pathogenic | 0.7295 | pathogenic | -0.176 | Destabilizing | 1.0 | D | 0.599 | neutral | None | None | None | None | N |
S/W | 0.9125 | likely_pathogenic | 0.9208 | pathogenic | -0.85 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
S/Y | 0.7561 | likely_pathogenic | 0.7812 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.