Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30383 | 91372;91373;91374 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
N2AB | 28742 | 86449;86450;86451 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
N2A | 27815 | 83668;83669;83670 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
N2B | 21318 | 64177;64178;64179 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
Novex-1 | 21443 | 64552;64553;64554 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
Novex-2 | 21510 | 64753;64754;64755 | chr2:178551753;178551752;178551751 | chr2:179416480;179416479;179416478 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs749647536 | -0.194 | 1.0 | N | 0.671 | 0.241 | 0.372087925617 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
E/Q | rs749647536 | -0.194 | 1.0 | N | 0.671 | 0.241 | 0.372087925617 | gnomAD-4.0.0 | 1.3684E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2645 | likely_benign | 0.3099 | benign | -0.516 | Destabilizing | 0.999 | D | 0.673 | neutral | N | 0.505589649 | None | None | N |
E/C | 0.8647 | likely_pathogenic | 0.8815 | pathogenic | -0.374 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/D | 0.1495 | likely_benign | 0.1625 | benign | -0.677 | Destabilizing | 0.999 | D | 0.527 | neutral | N | 0.511747617 | None | None | N |
E/F | 0.8056 | likely_pathogenic | 0.8322 | pathogenic | 0.249 | Stabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/G | 0.317 | likely_benign | 0.3977 | ambiguous | -0.849 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.469331323 | None | None | N |
E/H | 0.5931 | likely_pathogenic | 0.6331 | pathogenic | 0.41 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/I | 0.4226 | ambiguous | 0.4725 | ambiguous | 0.381 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/K | 0.3814 | ambiguous | 0.4541 | ambiguous | 0.025 | Stabilizing | 0.999 | D | 0.617 | neutral | N | 0.497316883 | None | None | N |
E/L | 0.5673 | likely_pathogenic | 0.628 | pathogenic | 0.381 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/M | 0.5602 | ambiguous | 0.6133 | pathogenic | 0.463 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
E/N | 0.3216 | likely_benign | 0.3702 | ambiguous | -0.734 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/P | 0.9444 | likely_pathogenic | 0.9627 | pathogenic | 0.104 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/Q | 0.208 | likely_benign | 0.2338 | benign | -0.583 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.502896061 | None | None | N |
E/R | 0.5272 | ambiguous | 0.5864 | pathogenic | 0.438 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/S | 0.2714 | likely_benign | 0.3072 | benign | -0.937 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/T | 0.2863 | likely_benign | 0.3209 | benign | -0.64 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/V | 0.2812 | likely_benign | 0.3206 | benign | 0.104 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.519116307 | None | None | N |
E/W | 0.9343 | likely_pathogenic | 0.9453 | pathogenic | 0.578 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.6867 | likely_pathogenic | 0.7288 | pathogenic | 0.546 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.