Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30385 | 91378;91379;91380 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
N2AB | 28744 | 86455;86456;86457 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
N2A | 27817 | 83674;83675;83676 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
N2B | 21320 | 64183;64184;64185 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
Novex-1 | 21445 | 64558;64559;64560 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
Novex-2 | 21512 | 64759;64760;64761 | chr2:178551747;178551746;178551745 | chr2:179416474;179416473;179416472 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs780885701 | -0.431 | 1.0 | N | 0.77 | 0.396 | 0.389126455913 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11383E-04 | None | 0 | None | 0 | 0 | 0 |
R/T | rs780885701 | -0.431 | 1.0 | N | 0.77 | 0.396 | 0.389126455913 | gnomAD-4.0.0 | 3.18249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.54631E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.799 | likely_pathogenic | 0.7734 | pathogenic | -1.45 | Destabilizing | 0.999 | D | 0.653 | neutral | None | None | None | None | N |
R/C | 0.3367 | likely_benign | 0.3154 | benign | -1.499 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
R/D | 0.9457 | likely_pathogenic | 0.9329 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
R/E | 0.7638 | likely_pathogenic | 0.7238 | pathogenic | -0.416 | Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
R/F | 0.7632 | likely_pathogenic | 0.7295 | pathogenic | -1.405 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
R/G | 0.7377 | likely_pathogenic | 0.721 | pathogenic | -1.745 | Destabilizing | 1.0 | D | 0.749 | deleterious | N | 0.478041055 | None | None | N |
R/H | 0.169 | likely_benign | 0.1462 | benign | -1.866 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
R/I | 0.5161 | ambiguous | 0.4613 | ambiguous | -0.643 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.511726188 | None | None | N |
R/K | 0.1637 | likely_benign | 0.1459 | benign | -1.437 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.424376562 | None | None | N |
R/L | 0.4699 | ambiguous | 0.4271 | ambiguous | -0.643 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
R/M | 0.5716 | likely_pathogenic | 0.515 | ambiguous | -0.808 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
R/N | 0.8938 | likely_pathogenic | 0.875 | pathogenic | -0.905 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
R/P | 0.9018 | likely_pathogenic | 0.8876 | pathogenic | -0.894 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
R/Q | 0.1926 | likely_benign | 0.1757 | benign | -1.135 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
R/S | 0.851 | likely_pathogenic | 0.8362 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.472399795 | None | None | N |
R/T | 0.6057 | likely_pathogenic | 0.5381 | ambiguous | -1.511 | Destabilizing | 1.0 | D | 0.77 | deleterious | N | 0.431278318 | None | None | N |
R/V | 0.6077 | likely_pathogenic | 0.5558 | ambiguous | -0.894 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
R/W | 0.3217 | likely_benign | 0.2901 | benign | -0.966 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
R/Y | 0.598 | likely_pathogenic | 0.5578 | ambiguous | -0.684 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.