Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30404 | 91435;91436;91437 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
N2AB | 28763 | 86512;86513;86514 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
N2A | 27836 | 83731;83732;83733 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
N2B | 21339 | 64240;64241;64242 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
Novex-1 | 21464 | 64615;64616;64617 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
Novex-2 | 21531 | 64816;64817;64818 | chr2:178551690;178551689;178551688 | chr2:179416417;179416416;179416415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.966 | N | 0.49 | 0.29 | 0.643794017197 | gnomAD-4.0.0 | 1.59575E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86776E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0597 | likely_benign | 0.0591 | benign | -0.388 | Destabilizing | 0.005 | N | 0.077 | neutral | N | 0.415853079 | None | None | I |
S/C | 0.0983 | likely_benign | 0.0999 | benign | -0.246 | Destabilizing | 0.997 | D | 0.367 | neutral | N | 0.47863694 | None | None | I |
S/D | 0.3082 | likely_benign | 0.3668 | ambiguous | -0.08 | Destabilizing | 0.728 | D | 0.255 | neutral | None | None | None | None | I |
S/E | 0.3922 | ambiguous | 0.4176 | ambiguous | -0.196 | Destabilizing | 0.842 | D | 0.259 | neutral | None | None | None | None | I |
S/F | 0.1597 | likely_benign | 0.1768 | benign | -1.118 | Destabilizing | 0.966 | D | 0.49 | neutral | N | 0.472053574 | None | None | I |
S/G | 0.0855 | likely_benign | 0.0939 | benign | -0.439 | Destabilizing | 0.525 | D | 0.335 | neutral | None | None | None | None | I |
S/H | 0.2591 | likely_benign | 0.2895 | benign | -0.945 | Destabilizing | 0.974 | D | 0.386 | neutral | None | None | None | None | I |
S/I | 0.0915 | likely_benign | 0.0904 | benign | -0.381 | Destabilizing | 0.949 | D | 0.49 | neutral | None | None | None | None | I |
S/K | 0.4466 | ambiguous | 0.4934 | ambiguous | -0.369 | Destabilizing | 0.067 | N | 0.159 | neutral | None | None | None | None | I |
S/L | 0.0649 | likely_benign | 0.0654 | benign | -0.381 | Destabilizing | 0.728 | D | 0.497 | neutral | None | None | None | None | I |
S/M | 0.1338 | likely_benign | 0.1242 | benign | -0.004 | Destabilizing | 0.991 | D | 0.376 | neutral | None | None | None | None | I |
S/N | 0.096 | likely_benign | 0.1073 | benign | -0.11 | Destabilizing | 0.007 | N | 0.067 | neutral | None | None | None | None | I |
S/P | 0.1802 | likely_benign | 0.2783 | benign | -0.359 | Destabilizing | 0.966 | D | 0.41 | neutral | N | 0.459414642 | None | None | I |
S/Q | 0.3454 | ambiguous | 0.3652 | ambiguous | -0.438 | Destabilizing | 0.949 | D | 0.297 | neutral | None | None | None | None | I |
S/R | 0.3942 | ambiguous | 0.4456 | ambiguous | -0.116 | Destabilizing | 0.728 | D | 0.451 | neutral | None | None | None | None | I |
S/T | 0.0699 | likely_benign | 0.0701 | benign | -0.234 | Destabilizing | 0.051 | N | 0.109 | neutral | N | 0.478421691 | None | None | I |
S/V | 0.1088 | likely_benign | 0.1067 | benign | -0.359 | Destabilizing | 0.728 | D | 0.505 | neutral | None | None | None | None | I |
S/W | 0.3147 | likely_benign | 0.3552 | ambiguous | -1.116 | Destabilizing | 0.998 | D | 0.548 | neutral | None | None | None | None | I |
S/Y | 0.152 | likely_benign | 0.1708 | benign | -0.835 | Destabilizing | 0.989 | D | 0.488 | neutral | N | 0.489993245 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.