Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30413 | 91462;91463;91464 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
N2AB | 28772 | 86539;86540;86541 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
N2A | 27845 | 83758;83759;83760 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
N2B | 21348 | 64267;64268;64269 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
Novex-1 | 21473 | 64642;64643;64644 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
Novex-2 | 21540 | 64843;64844;64845 | chr2:178551663;178551662;178551661 | chr2:179416390;179416389;179416388 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 0.953 | N | 0.609 | 0.236 | 0.232513804876 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0553 | likely_benign | 0.0585 | benign | -1.728 | Destabilizing | 0.953 | D | 0.591 | neutral | N | 0.481325923 | None | None | N |
P/C | 0.3645 | ambiguous | 0.3774 | ambiguous | -1.121 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
P/D | 0.7254 | likely_pathogenic | 0.7298 | pathogenic | -1.708 | Destabilizing | 0.964 | D | 0.607 | neutral | None | None | None | None | N |
P/E | 0.4653 | ambiguous | 0.4786 | ambiguous | -1.699 | Destabilizing | 0.931 | D | 0.582 | neutral | None | None | None | None | N |
P/F | 0.5124 | ambiguous | 0.5434 | ambiguous | -1.389 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
P/G | 0.3751 | ambiguous | 0.3785 | ambiguous | -2.057 | Highly Destabilizing | 0.982 | D | 0.656 | prob.neutral | None | None | None | None | N |
P/H | 0.3382 | likely_benign | 0.3547 | ambiguous | -1.533 | Destabilizing | 0.999 | D | 0.695 | prob.delet. | None | None | None | None | N |
P/I | 0.1913 | likely_benign | 0.2022 | benign | -0.911 | Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
P/K | 0.5846 | likely_pathogenic | 0.6104 | pathogenic | -1.31 | Destabilizing | 0.931 | D | 0.593 | neutral | None | None | None | None | N |
P/L | 0.1467 | likely_benign | 0.1574 | benign | -0.911 | Destabilizing | 0.986 | D | 0.736 | deleterious | N | 0.520209598 | None | None | N |
P/M | 0.2812 | likely_benign | 0.2858 | benign | -0.659 | Destabilizing | 1.0 | D | 0.7 | prob.delet. | None | None | None | None | N |
P/N | 0.4344 | ambiguous | 0.4359 | ambiguous | -1.137 | Destabilizing | 0.995 | D | 0.681 | prob.neutral | None | None | None | None | N |
P/Q | 0.2525 | likely_benign | 0.2628 | benign | -1.337 | Destabilizing | 0.441 | N | 0.412 | neutral | N | 0.468353364 | None | None | N |
P/R | 0.4471 | ambiguous | 0.4821 | ambiguous | -0.741 | Destabilizing | 0.986 | D | 0.6 | neutral | N | 0.49485141 | None | None | N |
P/S | 0.1244 | likely_benign | 0.1248 | benign | -1.671 | Destabilizing | 0.953 | D | 0.609 | neutral | N | 0.521017675 | None | None | N |
P/T | 0.0919 | likely_benign | 0.0915 | benign | -1.555 | Destabilizing | 0.976 | D | 0.603 | neutral | N | 0.51060868 | None | None | N |
P/V | 0.1321 | likely_benign | 0.1385 | benign | -1.15 | Destabilizing | 0.995 | D | 0.633 | neutral | None | None | None | None | N |
P/W | 0.8166 | likely_pathogenic | 0.8362 | pathogenic | -1.576 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
P/Y | 0.5611 | ambiguous | 0.5987 | pathogenic | -1.295 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.