Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30467 | 91624;91625;91626 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
N2AB | 28826 | 86701;86702;86703 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
N2A | 27899 | 83920;83921;83922 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
N2B | 21402 | 64429;64430;64431 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
Novex-1 | 21527 | 64804;64805;64806 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
Novex-2 | 21594 | 65005;65006;65007 | chr2:178551132;178551131;178551130 | chr2:179415859;179415858;179415857 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/C | rs775591945 | -0.078 | 1.0 | N | 0.551 | 0.288 | None | gnomAD-2.1.1 | 5.72E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 1.0179E-04 | 1.40845E-04 |
R/C | rs775591945 | -0.078 | 1.0 | N | 0.551 | 0.288 | None | gnomAD-3.1.2 | 1.05255E-04 | None | None | None | None | N | None | 9.67E-05 | 0 | 0 | 0 | 1.92976E-04 | None | 0 | 0 | 1.61731E-04 | 0 | 0 |
R/C | rs775591945 | -0.078 | 1.0 | N | 0.551 | 0.288 | None | gnomAD-4.0.0 | 1.76042E-04 | None | None | None | None | N | None | 6.68271E-05 | 5.004E-05 | None | 0 | 8.93017E-05 | None | 0 | 0 | 2.23796E-04 | 3.29424E-05 | 8.00717E-05 |
R/H | rs572793448 | -0.555 | 0.26 | N | 0.301 | 0.145 | None | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 2.06817E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 7.83E-06 | 0 |
R/H | rs572793448 | -0.555 | 0.26 | N | 0.301 | 0.145 | None | gnomAD-3.1.2 | 8.54E-05 | None | None | None | None | N | None | 3.13813E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/H | rs572793448 | -0.555 | 0.26 | N | 0.301 | 0.145 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
R/H | rs572793448 | -0.555 | 0.26 | N | 0.301 | 0.145 | None | gnomAD-4.0.0 | 1.36348E-05 | None | None | None | None | N | None | 2.13333E-04 | 0 | None | 0 | 8.93136E-05 | None | 0 | 0 | 8.47693E-07 | 0 | 1.60097E-05 |
R/S | None | None | 0.956 | N | 0.523 | 0.229 | 0.341934017632 | gnomAD-4.0.0 | 6.84349E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99575E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5898 | likely_pathogenic | 0.6488 | pathogenic | 0.118 | Stabilizing | 0.919 | D | 0.5 | neutral | None | None | None | None | N |
R/C | 0.3805 | ambiguous | 0.4064 | ambiguous | -0.176 | Destabilizing | 1.0 | D | 0.551 | neutral | N | 0.482142432 | None | None | N |
R/D | 0.7509 | likely_pathogenic | 0.8047 | pathogenic | -0.284 | Destabilizing | 0.976 | D | 0.481 | neutral | None | None | None | None | N |
R/E | 0.5487 | ambiguous | 0.6098 | pathogenic | -0.232 | Destabilizing | 0.919 | D | 0.497 | neutral | None | None | None | None | N |
R/F | 0.7542 | likely_pathogenic | 0.7952 | pathogenic | -0.159 | Destabilizing | 0.988 | D | 0.53 | neutral | None | None | None | None | N |
R/G | 0.3958 | ambiguous | 0.4585 | ambiguous | -0.04 | Destabilizing | 0.956 | D | 0.512 | neutral | N | 0.456446121 | None | None | N |
R/H | 0.1637 | likely_benign | 0.1738 | benign | -0.563 | Destabilizing | 0.26 | N | 0.301 | neutral | N | 0.495719372 | None | None | N |
R/I | 0.4983 | ambiguous | 0.5361 | ambiguous | 0.491 | Stabilizing | 0.988 | D | 0.525 | neutral | None | None | None | None | N |
R/K | 0.1134 | likely_benign | 0.1242 | benign | -0.086 | Destabilizing | 0.06 | N | 0.213 | neutral | None | None | None | None | N |
R/L | 0.4254 | ambiguous | 0.4649 | ambiguous | 0.491 | Stabilizing | 0.956 | D | 0.489 | neutral | N | 0.47626682 | None | None | N |
R/M | 0.4816 | ambiguous | 0.524 | ambiguous | -0.022 | Destabilizing | 0.999 | D | 0.519 | neutral | None | None | None | None | N |
R/N | 0.679 | likely_pathogenic | 0.7248 | pathogenic | -0.004 | Destabilizing | 0.919 | D | 0.493 | neutral | None | None | None | None | N |
R/P | 0.587 | likely_pathogenic | 0.6568 | pathogenic | 0.386 | Stabilizing | 0.998 | D | 0.525 | neutral | N | 0.488579969 | None | None | N |
R/Q | 0.1654 | likely_benign | 0.1732 | benign | -0.028 | Destabilizing | 0.919 | D | 0.513 | neutral | None | None | None | None | N |
R/S | 0.6932 | likely_pathogenic | 0.7429 | pathogenic | -0.167 | Destabilizing | 0.956 | D | 0.523 | neutral | N | 0.463452238 | None | None | N |
R/T | 0.4637 | ambiguous | 0.5225 | ambiguous | -0.002 | Destabilizing | 0.959 | D | 0.503 | neutral | None | None | None | None | N |
R/V | 0.553 | ambiguous | 0.603 | pathogenic | 0.386 | Stabilizing | 0.988 | D | 0.537 | neutral | None | None | None | None | N |
R/W | 0.364 | ambiguous | 0.4059 | ambiguous | -0.336 | Destabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
R/Y | 0.533 | ambiguous | 0.584 | pathogenic | 0.076 | Stabilizing | 0.976 | D | 0.517 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.