Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30484 | 91675;91676;91677 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
N2AB | 28843 | 86752;86753;86754 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
N2A | 27916 | 83971;83972;83973 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
N2B | 21419 | 64480;64481;64482 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
Novex-1 | 21544 | 64855;64856;64857 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
Novex-2 | 21611 | 65056;65057;65058 | chr2:178551081;178551080;178551079 | chr2:179415808;179415807;179415806 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1318850182 | None | 0.983 | N | 0.757 | 0.444 | 0.425028116352 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1318850182 | None | 0.983 | N | 0.757 | 0.444 | 0.425028116352 | gnomAD-4.0.0 | 6.57402E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46994E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1054 | likely_benign | 0.1212 | benign | -0.331 | Destabilizing | 0.63 | D | 0.413 | neutral | N | 0.480424593 | None | None | N |
T/C | 0.4854 | ambiguous | 0.5739 | pathogenic | -0.292 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/D | 0.5627 | ambiguous | 0.6593 | pathogenic | 0.304 | Stabilizing | 0.975 | D | 0.712 | prob.delet. | None | None | None | None | N |
T/E | 0.4624 | ambiguous | 0.5543 | ambiguous | 0.234 | Stabilizing | 0.975 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/F | 0.3884 | ambiguous | 0.4975 | ambiguous | -0.817 | Destabilizing | 0.987 | D | 0.76 | deleterious | None | None | None | None | N |
T/G | 0.2245 | likely_benign | 0.2722 | benign | -0.462 | Destabilizing | 0.845 | D | 0.602 | neutral | None | None | None | None | N |
T/H | 0.3523 | ambiguous | 0.4329 | ambiguous | -0.691 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
T/I | 0.3014 | likely_benign | 0.395 | ambiguous | -0.106 | Destabilizing | 0.983 | D | 0.757 | deleterious | N | 0.487946238 | None | None | N |
T/K | 0.3205 | likely_benign | 0.3998 | ambiguous | -0.288 | Destabilizing | 0.967 | D | 0.716 | prob.delet. | N | 0.474922813 | None | None | N |
T/L | 0.1446 | likely_benign | 0.1763 | benign | -0.106 | Destabilizing | 0.916 | D | 0.609 | neutral | None | None | None | None | N |
T/M | 0.1126 | likely_benign | 0.1294 | benign | -0.026 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
T/N | 0.1558 | likely_benign | 0.1884 | benign | -0.105 | Destabilizing | 0.975 | D | 0.591 | neutral | None | None | None | None | N |
T/P | 0.1449 | likely_benign | 0.1616 | benign | -0.152 | Destabilizing | 0.983 | D | 0.759 | deleterious | N | 0.478930109 | None | None | N |
T/Q | 0.2938 | likely_benign | 0.3483 | ambiguous | -0.307 | Destabilizing | 0.975 | D | 0.764 | deleterious | None | None | None | None | N |
T/R | 0.3153 | likely_benign | 0.4074 | ambiguous | -0.025 | Destabilizing | 0.967 | D | 0.763 | deleterious | N | 0.515403998 | None | None | N |
T/S | 0.1069 | likely_benign | 0.1224 | benign | -0.338 | Destabilizing | 0.099 | N | 0.24 | neutral | N | 0.506648442 | None | None | N |
T/V | 0.2004 | likely_benign | 0.259 | benign | -0.152 | Destabilizing | 0.916 | D | 0.499 | neutral | None | None | None | None | N |
T/W | 0.7262 | likely_pathogenic | 0.8096 | pathogenic | -0.828 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/Y | 0.414 | ambiguous | 0.5193 | ambiguous | -0.531 | Destabilizing | 0.996 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.