Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30492 | 91699;91700;91701 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
N2AB | 28851 | 86776;86777;86778 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
N2A | 27924 | 83995;83996;83997 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
N2B | 21427 | 64504;64505;64506 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
Novex-1 | 21552 | 64879;64880;64881 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
Novex-2 | 21619 | 65080;65081;65082 | chr2:178551057;178551056;178551055 | chr2:179415784;179415783;179415782 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs769678577 | -1.391 | 0.997 | D | 0.879 | 0.801 | 0.847396025296 | gnomAD-2.1.1 | 2.15E-05 | None | None | None | None | N | None | 0 | 8.51E-05 | None | 0 | 0 | None | 0 | None | 0 | 2.35E-05 | 0 |
Y/C | rs769678577 | -1.391 | 0.997 | D | 0.879 | 0.801 | 0.847396025296 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/C | rs769678577 | -1.391 | 0.997 | D | 0.879 | 0.801 | 0.847396025296 | gnomAD-4.0.0 | 1.79754E-05 | None | None | None | None | N | None | 0 | 3.33533E-05 | None | 0 | 0 | None | 0 | 0 | 2.28884E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9464 | likely_pathogenic | 0.9635 | pathogenic | -2.969 | Highly Destabilizing | 0.86 | D | 0.843 | deleterious | None | None | None | None | N |
Y/C | 0.4836 | ambiguous | 0.5893 | pathogenic | -1.788 | Destabilizing | 0.997 | D | 0.879 | deleterious | D | 0.637646868 | None | None | N |
Y/D | 0.9572 | likely_pathogenic | 0.9702 | pathogenic | -3.094 | Highly Destabilizing | 0.99 | D | 0.895 | deleterious | D | 0.675025376 | None | None | N |
Y/E | 0.9777 | likely_pathogenic | 0.9864 | pathogenic | -2.884 | Highly Destabilizing | 0.993 | D | 0.879 | deleterious | None | None | None | None | N |
Y/F | 0.0981 | likely_benign | 0.1336 | benign | -1.035 | Destabilizing | 0.006 | N | 0.431 | neutral | D | 0.591487181 | None | None | N |
Y/G | 0.936 | likely_pathogenic | 0.9528 | pathogenic | -3.399 | Highly Destabilizing | 0.978 | D | 0.869 | deleterious | None | None | None | None | N |
Y/H | 0.6448 | likely_pathogenic | 0.729 | pathogenic | -1.942 | Destabilizing | 0.99 | D | 0.769 | deleterious | D | 0.659006016 | None | None | N |
Y/I | 0.8455 | likely_pathogenic | 0.8997 | pathogenic | -1.549 | Destabilizing | 0.754 | D | 0.832 | deleterious | None | None | None | None | N |
Y/K | 0.9774 | likely_pathogenic | 0.9876 | pathogenic | -2.13 | Highly Destabilizing | 0.978 | D | 0.88 | deleterious | None | None | None | None | N |
Y/L | 0.8562 | likely_pathogenic | 0.8923 | pathogenic | -1.549 | Destabilizing | 0.559 | D | 0.78 | deleterious | None | None | None | None | N |
Y/M | 0.8833 | likely_pathogenic | 0.9175 | pathogenic | -1.319 | Destabilizing | 0.978 | D | 0.85 | deleterious | None | None | None | None | N |
Y/N | 0.7995 | likely_pathogenic | 0.8407 | pathogenic | -2.913 | Highly Destabilizing | 0.99 | D | 0.881 | deleterious | D | 0.674823572 | None | None | N |
Y/P | 0.9943 | likely_pathogenic | 0.9969 | pathogenic | -2.036 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
Y/Q | 0.9498 | likely_pathogenic | 0.9688 | pathogenic | -2.646 | Highly Destabilizing | 0.993 | D | 0.842 | deleterious | None | None | None | None | N |
Y/R | 0.9502 | likely_pathogenic | 0.9686 | pathogenic | -1.915 | Destabilizing | 0.978 | D | 0.881 | deleterious | None | None | None | None | N |
Y/S | 0.8626 | likely_pathogenic | 0.8962 | pathogenic | -3.325 | Highly Destabilizing | 0.97 | D | 0.854 | deleterious | D | 0.675025376 | None | None | N |
Y/T | 0.933 | likely_pathogenic | 0.9531 | pathogenic | -2.991 | Highly Destabilizing | 0.978 | D | 0.85 | deleterious | None | None | None | None | N |
Y/V | 0.7727 | likely_pathogenic | 0.8355 | pathogenic | -2.036 | Highly Destabilizing | 0.86 | D | 0.81 | deleterious | None | None | None | None | N |
Y/W | 0.5235 | ambiguous | 0.6139 | pathogenic | -0.341 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.