Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30497 | 91714;91715;91716 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
N2AB | 28856 | 86791;86792;86793 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
N2A | 27929 | 84010;84011;84012 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
N2B | 21432 | 64519;64520;64521 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
Novex-1 | 21557 | 64894;64895;64896 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
Novex-2 | 21624 | 65095;65096;65097 | chr2:178551042;178551041;178551040 | chr2:179415769;179415768;179415767 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.19 | N | 0.42 | 0.05 | 0.519133540473 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4335 | ambiguous | 0.43 | ambiguous | -2.255 | Highly Destabilizing | 0.775 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/C | 0.7385 | likely_pathogenic | 0.7559 | pathogenic | -1.738 | Destabilizing | 0.996 | D | 0.74 | deleterious | None | None | None | None | N |
I/D | 0.9701 | likely_pathogenic | 0.9729 | pathogenic | -2.018 | Highly Destabilizing | 0.987 | D | 0.817 | deleterious | None | None | None | None | N |
I/E | 0.9009 | likely_pathogenic | 0.9056 | pathogenic | -1.92 | Destabilizing | 0.961 | D | 0.804 | deleterious | None | None | None | None | N |
I/F | 0.1957 | likely_benign | 0.2044 | benign | -1.459 | Destabilizing | 0.82 | D | 0.773 | deleterious | N | 0.496970166 | None | None | N |
I/G | 0.8609 | likely_pathogenic | 0.8668 | pathogenic | -2.674 | Highly Destabilizing | 0.961 | D | 0.788 | deleterious | None | None | None | None | N |
I/H | 0.6975 | likely_pathogenic | 0.7074 | pathogenic | -1.876 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
I/K | 0.6514 | likely_pathogenic | 0.6635 | pathogenic | -1.534 | Destabilizing | 0.961 | D | 0.783 | deleterious | None | None | None | None | N |
I/L | 0.1166 | likely_benign | 0.1169 | benign | -1.11 | Destabilizing | 0.003 | N | 0.249 | neutral | N | 0.485502379 | None | None | N |
I/M | 0.1059 | likely_benign | 0.1105 | benign | -1.111 | Destabilizing | 0.19 | N | 0.523 | neutral | N | 0.467431992 | None | None | N |
I/N | 0.6593 | likely_pathogenic | 0.6836 | pathogenic | -1.54 | Destabilizing | 0.983 | D | 0.809 | deleterious | N | 0.497195267 | None | None | N |
I/P | 0.9864 | likely_pathogenic | 0.989 | pathogenic | -1.467 | Destabilizing | 0.987 | D | 0.812 | deleterious | None | None | None | None | N |
I/Q | 0.6816 | likely_pathogenic | 0.6938 | pathogenic | -1.631 | Destabilizing | 0.961 | D | 0.815 | deleterious | None | None | None | None | N |
I/R | 0.5005 | ambiguous | 0.524 | ambiguous | -1.064 | Destabilizing | 0.961 | D | 0.817 | deleterious | None | None | None | None | N |
I/S | 0.4756 | ambiguous | 0.4821 | ambiguous | -2.268 | Highly Destabilizing | 0.949 | D | 0.751 | deleterious | N | 0.452813957 | None | None | N |
I/T | 0.1976 | likely_benign | 0.1857 | benign | -2.043 | Highly Destabilizing | 0.722 | D | 0.755 | deleterious | N | 0.491985634 | None | None | N |
I/V | 0.1011 | likely_benign | 0.1005 | benign | -1.467 | Destabilizing | 0.19 | N | 0.42 | neutral | N | 0.459566571 | None | None | N |
I/W | 0.8128 | likely_pathogenic | 0.8286 | pathogenic | -1.596 | Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | N |
I/Y | 0.6343 | likely_pathogenic | 0.6619 | pathogenic | -1.368 | Destabilizing | 0.961 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.