Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30501 | 91726;91727;91728 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
N2AB | 28860 | 86803;86804;86805 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
N2A | 27933 | 84022;84023;84024 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
N2B | 21436 | 64531;64532;64533 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
Novex-1 | 21561 | 64906;64907;64908 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
Novex-2 | 21628 | 65107;65108;65109 | chr2:178551030;178551029;178551028 | chr2:179415757;179415756;179415755 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1299510786 | -0.064 | 1.0 | D | 0.627 | 0.392 | 0.57733738444 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.61E-05 | None | 0 | None | 0 | 0 | 0 |
A/V | rs1299510786 | -0.064 | 1.0 | D | 0.627 | 0.392 | 0.57733738444 | gnomAD-4.0.0 | 3.18468E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77948E-05 | None | 0 | 0 | 2.85974E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8313 | likely_pathogenic | 0.7893 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
A/D | 0.9503 | likely_pathogenic | 0.9262 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.466167256 | None | None | I |
A/E | 0.8925 | likely_pathogenic | 0.8569 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
A/F | 0.8339 | likely_pathogenic | 0.7921 | pathogenic | -0.974 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | I |
A/G | 0.4341 | ambiguous | 0.3651 | ambiguous | -0.504 | Destabilizing | 1.0 | D | 0.525 | neutral | N | 0.463056537 | None | None | I |
A/H | 0.9223 | likely_pathogenic | 0.8959 | pathogenic | -0.516 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
A/I | 0.6502 | likely_pathogenic | 0.5585 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
A/K | 0.9645 | likely_pathogenic | 0.9425 | pathogenic | -0.599 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
A/L | 0.5689 | likely_pathogenic | 0.477 | ambiguous | -0.404 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | I |
A/M | 0.5647 | likely_pathogenic | 0.5014 | ambiguous | -0.338 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
A/N | 0.7985 | likely_pathogenic | 0.7245 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
A/P | 0.966 | likely_pathogenic | 0.9356 | pathogenic | -0.375 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | D | 0.523850123 | None | None | I |
A/Q | 0.8331 | likely_pathogenic | 0.7809 | pathogenic | -0.583 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | I |
A/R | 0.9118 | likely_pathogenic | 0.8764 | pathogenic | -0.171 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
A/S | 0.1944 | likely_benign | 0.1733 | benign | -0.59 | Destabilizing | 1.0 | D | 0.543 | neutral | N | 0.489601477 | None | None | I |
A/T | 0.3198 | likely_benign | 0.2397 | benign | -0.646 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.511438186 | None | None | I |
A/V | 0.4118 | ambiguous | 0.3211 | benign | -0.375 | Destabilizing | 1.0 | D | 0.627 | neutral | D | 0.522983331 | None | None | I |
A/W | 0.9759 | likely_pathogenic | 0.9671 | pathogenic | -1.099 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
A/Y | 0.9144 | likely_pathogenic | 0.8868 | pathogenic | -0.741 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.