Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30538 | 91837;91838;91839 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
N2AB | 28897 | 86914;86915;86916 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
N2A | 27970 | 84133;84134;84135 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
N2B | 21473 | 64642;64643;64644 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
Novex-1 | 21598 | 65017;65018;65019 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
Novex-2 | 21665 | 65218;65219;65220 | chr2:178550226;178550225;178550224 | chr2:179414953;179414952;179414951 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1231839154 | None | 0.324 | D | 0.391 | 0.462 | 0.684537292048 | gnomAD-4.0.0 | 1.20035E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
I/V | None | None | 0.001 | N | 0.157 | 0.078 | 0.340753184043 | gnomAD-4.0.0 | 1.59192E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5124 | ambiguous | 0.5997 | pathogenic | -2.31 | Highly Destabilizing | 0.004 | N | 0.186 | neutral | None | None | None | None | I |
I/C | 0.6654 | likely_pathogenic | 0.7192 | pathogenic | -1.587 | Destabilizing | 0.944 | D | 0.447 | neutral | None | None | None | None | I |
I/D | 0.9425 | likely_pathogenic | 0.9625 | pathogenic | -2.077 | Highly Destabilizing | 0.818 | D | 0.527 | neutral | None | None | None | None | I |
I/E | 0.8473 | likely_pathogenic | 0.8921 | pathogenic | -1.968 | Destabilizing | 0.818 | D | 0.54 | neutral | None | None | None | None | I |
I/F | 0.1977 | likely_benign | 0.2628 | benign | -1.435 | Destabilizing | 0.627 | D | 0.453 | neutral | N | 0.467568058 | None | None | I |
I/G | 0.7929 | likely_pathogenic | 0.8553 | pathogenic | -2.749 | Highly Destabilizing | 0.388 | N | 0.519 | neutral | None | None | None | None | I |
I/H | 0.741 | likely_pathogenic | 0.813 | pathogenic | -1.97 | Destabilizing | 0.981 | D | 0.508 | neutral | None | None | None | None | I |
I/K | 0.6549 | likely_pathogenic | 0.7133 | pathogenic | -1.756 | Destabilizing | 0.818 | D | 0.535 | neutral | None | None | None | None | I |
I/L | 0.1031 | likely_benign | 0.1145 | benign | -1.104 | Destabilizing | None | N | 0.109 | neutral | N | 0.468528063 | None | None | I |
I/M | 0.1204 | likely_benign | 0.1356 | benign | -0.977 | Destabilizing | 0.627 | D | 0.461 | neutral | D | 0.524133417 | None | None | I |
I/N | 0.6283 | likely_pathogenic | 0.7029 | pathogenic | -1.763 | Destabilizing | 0.912 | D | 0.515 | neutral | N | 0.519716155 | None | None | I |
I/P | 0.9415 | likely_pathogenic | 0.9588 | pathogenic | -1.48 | Destabilizing | 0.818 | D | 0.511 | neutral | None | None | None | None | I |
I/Q | 0.6707 | likely_pathogenic | 0.7366 | pathogenic | -1.822 | Destabilizing | 0.932 | D | 0.521 | neutral | None | None | None | None | I |
I/R | 0.5844 | likely_pathogenic | 0.6617 | pathogenic | -1.224 | Destabilizing | 0.818 | D | 0.512 | neutral | None | None | None | None | I |
I/S | 0.5533 | ambiguous | 0.6445 | pathogenic | -2.463 | Highly Destabilizing | 0.193 | N | 0.429 | neutral | N | 0.489495126 | None | None | I |
I/T | 0.3701 | ambiguous | 0.432 | ambiguous | -2.229 | Highly Destabilizing | 0.324 | N | 0.391 | neutral | D | 0.523439983 | None | None | I |
I/V | 0.0759 | likely_benign | 0.0824 | benign | -1.48 | Destabilizing | 0.001 | N | 0.157 | neutral | N | 0.401740137 | None | None | I |
I/W | 0.8789 | likely_pathogenic | 0.9197 | pathogenic | -1.632 | Destabilizing | 0.981 | D | 0.539 | neutral | None | None | None | None | I |
I/Y | 0.6709 | likely_pathogenic | 0.7492 | pathogenic | -1.407 | Destabilizing | 0.818 | D | 0.458 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.