Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30539 | 91840;91841;91842 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
N2AB | 28898 | 86917;86918;86919 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
N2A | 27971 | 84136;84137;84138 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
N2B | 21474 | 64645;64646;64647 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
Novex-1 | 21599 | 65020;65021;65022 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
Novex-2 | 21666 | 65221;65222;65223 | chr2:178550223;178550222;178550221 | chr2:179414950;179414949;179414948 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1553536395 | -0.023 | 0.217 | N | 0.382 | 0.136 | 0.265010934533 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/R | rs1553536395 | -0.023 | 0.217 | N | 0.382 | 0.136 | 0.265010934533 | gnomAD-4.0.0 | 5.47454E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19661E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.459 | ambiguous | 0.6023 | pathogenic | -0.104 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | I |
K/C | 0.7263 | likely_pathogenic | 0.7992 | pathogenic | -0.345 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
K/D | 0.7416 | likely_pathogenic | 0.8478 | pathogenic | 0.108 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | I |
K/E | 0.3528 | ambiguous | 0.4903 | ambiguous | 0.143 | Stabilizing | 0.989 | D | 0.635 | neutral | N | 0.429663031 | None | None | I |
K/F | 0.8157 | likely_pathogenic | 0.8987 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
K/G | 0.5912 | likely_pathogenic | 0.7267 | pathogenic | -0.356 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
K/H | 0.3013 | likely_benign | 0.3673 | ambiguous | -0.609 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
K/I | 0.5165 | ambiguous | 0.6494 | pathogenic | 0.495 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
K/L | 0.4515 | ambiguous | 0.5702 | pathogenic | 0.495 | Stabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
K/M | 0.3637 | ambiguous | 0.481 | ambiguous | 0.237 | Stabilizing | 1.0 | D | 0.645 | neutral | D | 0.526941648 | None | None | I |
K/N | 0.5489 | ambiguous | 0.6862 | pathogenic | 0.01 | Stabilizing | 0.998 | D | 0.647 | neutral | N | 0.507219737 | None | None | I |
K/P | 0.5855 | likely_pathogenic | 0.7286 | pathogenic | 0.325 | Stabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | I |
K/Q | 0.165 | likely_benign | 0.2039 | benign | -0.134 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.500427051 | None | None | I |
K/R | 0.0809 | likely_benign | 0.0837 | benign | -0.209 | Destabilizing | 0.217 | N | 0.382 | neutral | N | 0.45336661 | None | None | I |
K/S | 0.5384 | ambiguous | 0.6731 | pathogenic | -0.535 | Destabilizing | 0.996 | D | 0.65 | neutral | None | None | None | None | I |
K/T | 0.2609 | likely_benign | 0.3619 | ambiguous | -0.333 | Destabilizing | 0.998 | D | 0.629 | neutral | N | 0.49277036 | None | None | I |
K/V | 0.4596 | ambiguous | 0.5858 | pathogenic | 0.325 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | I |
K/W | 0.7911 | likely_pathogenic | 0.8709 | pathogenic | -0.094 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
K/Y | 0.6921 | likely_pathogenic | 0.8031 | pathogenic | 0.23 | Stabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.