Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30554 | 91885;91886;91887 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
N2AB | 28913 | 86962;86963;86964 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
N2A | 27986 | 84181;84182;84183 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
N2B | 21489 | 64690;64691;64692 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
Novex-1 | 21614 | 65065;65066;65067 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
Novex-2 | 21681 | 65266;65267;65268 | chr2:178550178;178550177;178550176 | chr2:179414905;179414904;179414903 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1698777400 | None | 1.0 | D | 0.739 | 0.73 | 0.882422999392 | gnomAD-4.0.0 | 1.43684E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.88892E-05 | 0 | 0 |
P/Q | None | None | 1.0 | D | 0.726 | 0.751 | 0.794492043152 | gnomAD-4.0.0 | 6.84211E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99486E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.9111 | likely_pathogenic | 0.9013 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | D | 0.570837186 | None | None | I |
P/C | 0.9921 | likely_pathogenic | 0.9907 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/D | 0.9898 | likely_pathogenic | 0.989 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | I |
P/E | 0.9863 | likely_pathogenic | 0.9828 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
P/F | 0.9964 | likely_pathogenic | 0.9953 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
P/G | 0.9764 | likely_pathogenic | 0.973 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
P/H | 0.9816 | likely_pathogenic | 0.9779 | pathogenic | -0.182 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | I |
P/I | 0.9743 | likely_pathogenic | 0.9695 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
P/K | 0.9891 | likely_pathogenic | 0.9858 | pathogenic | -0.447 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | I |
P/L | 0.9429 | likely_pathogenic | 0.93 | pathogenic | -0.302 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.61270709 | None | None | I |
P/M | 0.9778 | likely_pathogenic | 0.9725 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
P/N | 0.9848 | likely_pathogenic | 0.983 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
P/Q | 0.9779 | likely_pathogenic | 0.9723 | pathogenic | -0.412 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.564089236 | None | None | I |
P/R | 0.9743 | likely_pathogenic | 0.968 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.766 | deleterious | D | 0.64968199 | None | None | I |
P/S | 0.9729 | likely_pathogenic | 0.9701 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | D | 0.570330207 | None | None | I |
P/T | 0.9406 | likely_pathogenic | 0.9322 | pathogenic | -0.501 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | D | 0.64968199 | None | None | I |
P/V | 0.9512 | likely_pathogenic | 0.9443 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
P/W | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -0.826 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
P/Y | 0.9945 | likely_pathogenic | 0.993 | pathogenic | -0.53 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.