Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30569 | 91930;91931;91932 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
N2AB | 28928 | 87007;87008;87009 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
N2A | 28001 | 84226;84227;84228 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
N2B | 21504 | 64735;64736;64737 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
Novex-1 | 21629 | 65110;65111;65112 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
Novex-2 | 21696 | 65311;65312;65313 | chr2:178550133;178550132;178550131 | chr2:179414860;179414859;179414858 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1060500543 | 0.365 | 0.638 | N | 0.451 | 0.21 | 0.337378238328 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
K/N | rs1060500543 | 0.365 | 0.638 | N | 0.451 | 0.21 | 0.337378238328 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs1060500543 | 0.365 | 0.638 | N | 0.451 | 0.21 | 0.337378238328 | gnomAD-4.0.0 | 9.2954E-06 | None | None | None | None | N | None | 1.33483E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18665E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.336 | likely_benign | 0.3965 | ambiguous | 0.061 | Stabilizing | 0.25 | N | 0.485 | neutral | None | None | None | None | N |
K/C | 0.6562 | likely_pathogenic | 0.6974 | pathogenic | -0.376 | Destabilizing | 0.982 | D | 0.616 | neutral | None | None | None | None | N |
K/D | 0.4407 | ambiguous | 0.5026 | ambiguous | -0.017 | Destabilizing | 0.7 | D | 0.471 | neutral | None | None | None | None | N |
K/E | 0.1726 | likely_benign | 0.2093 | benign | 0.012 | Stabilizing | 0.201 | N | 0.511 | neutral | N | 0.435124778 | None | None | N |
K/F | 0.7772 | likely_pathogenic | 0.825 | pathogenic | -0.087 | Destabilizing | 0.826 | D | 0.609 | neutral | None | None | None | None | N |
K/G | 0.305 | likely_benign | 0.3528 | ambiguous | -0.145 | Destabilizing | 0.399 | N | 0.461 | neutral | None | None | None | None | N |
K/H | 0.2878 | likely_benign | 0.3221 | benign | -0.294 | Destabilizing | 0.947 | D | 0.523 | neutral | None | None | None | None | N |
K/I | 0.4811 | ambiguous | 0.5463 | ambiguous | 0.531 | Stabilizing | 0.7 | D | 0.619 | neutral | None | None | None | None | N |
K/L | 0.3656 | ambiguous | 0.4189 | ambiguous | 0.531 | Stabilizing | 0.25 | N | 0.469 | neutral | None | None | None | None | N |
K/M | 0.2966 | likely_benign | 0.3489 | ambiguous | 0.052 | Stabilizing | 0.931 | D | 0.525 | neutral | D | 0.535214415 | None | None | N |
K/N | 0.3369 | likely_benign | 0.3919 | ambiguous | 0.02 | Stabilizing | 0.638 | D | 0.451 | neutral | N | 0.424910572 | None | None | N |
K/P | 0.3925 | ambiguous | 0.4464 | ambiguous | 0.402 | Stabilizing | 0.826 | D | 0.523 | neutral | None | None | None | None | N |
K/Q | 0.1262 | likely_benign | 0.1439 | benign | -0.059 | Destabilizing | 0.638 | D | 0.501 | neutral | N | 0.491191492 | None | None | N |
K/R | 0.078 | likely_benign | 0.0816 | benign | -0.098 | Destabilizing | 0.004 | N | 0.347 | neutral | N | 0.496906743 | None | None | N |
K/S | 0.3516 | ambiguous | 0.4134 | ambiguous | -0.394 | Destabilizing | 0.25 | N | 0.503 | neutral | None | None | None | None | N |
K/T | 0.206 | likely_benign | 0.2424 | benign | -0.214 | Destabilizing | 0.004 | N | 0.355 | neutral | N | 0.460023223 | None | None | N |
K/V | 0.4062 | ambiguous | 0.4683 | ambiguous | 0.402 | Stabilizing | 0.539 | D | 0.444 | neutral | None | None | None | None | N |
K/W | 0.6808 | likely_pathogenic | 0.728 | pathogenic | -0.166 | Destabilizing | 0.982 | D | 0.647 | neutral | None | None | None | None | N |
K/Y | 0.5775 | likely_pathogenic | 0.6318 | pathogenic | 0.191 | Stabilizing | 0.826 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.