Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30570 | 91933;91934;91935 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
N2AB | 28929 | 87010;87011;87012 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
N2A | 28002 | 84229;84230;84231 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
N2B | 21505 | 64738;64739;64740 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
Novex-1 | 21630 | 65113;65114;65115 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
Novex-2 | 21697 | 65314;65315;65316 | chr2:178550130;178550129;178550128 | chr2:179414857;179414856;179414855 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.001 | N | 0.231 | 0.038 | 0.0401082797425 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2276 | likely_benign | 0.264 | benign | None | Stabilizing | 0.016 | N | 0.275 | neutral | None | None | None | None | N |
R/C | 0.1852 | likely_benign | 0.2047 | benign | 0.041 | Stabilizing | 0.864 | D | 0.207 | neutral | None | None | None | None | N |
R/D | 0.4149 | ambiguous | 0.4804 | ambiguous | 0.021 | Stabilizing | 0.072 | N | 0.329 | neutral | None | None | None | None | N |
R/E | 0.2374 | likely_benign | 0.2828 | benign | 0.102 | Stabilizing | 0.016 | N | 0.214 | neutral | None | None | None | None | N |
R/F | 0.426 | ambiguous | 0.4724 | ambiguous | -0.089 | Destabilizing | 0.214 | N | 0.246 | neutral | None | None | None | None | N |
R/G | 0.129 | likely_benign | 0.1506 | benign | -0.24 | Destabilizing | None | N | 0.181 | neutral | N | 0.354713328 | None | None | N |
R/H | 0.108 | likely_benign | 0.1216 | benign | -0.804 | Destabilizing | 0.356 | N | 0.259 | neutral | None | None | None | None | N |
R/I | 0.2112 | likely_benign | 0.2363 | benign | 0.608 | Stabilizing | 0.038 | N | 0.326 | neutral | None | None | None | None | N |
R/K | 0.0642 | likely_benign | 0.0704 | benign | -0.011 | Destabilizing | None | N | 0.133 | neutral | N | 0.430579311 | None | None | N |
R/L | 0.1839 | likely_benign | 0.2057 | benign | 0.608 | Stabilizing | 0.006 | N | 0.287 | neutral | None | None | None | None | N |
R/M | 0.164 | likely_benign | 0.1837 | benign | 0.181 | Stabilizing | 0.005 | N | 0.217 | neutral | N | 0.486376665 | None | None | N |
R/N | 0.3053 | likely_benign | 0.3606 | ambiguous | 0.36 | Stabilizing | 0.072 | N | 0.247 | neutral | None | None | None | None | N |
R/P | 0.4076 | ambiguous | 0.4763 | ambiguous | 0.427 | Stabilizing | 0.136 | N | 0.324 | neutral | None | None | None | None | N |
R/Q | 0.0887 | likely_benign | 0.1001 | benign | 0.243 | Stabilizing | 0.038 | N | 0.282 | neutral | None | None | None | None | N |
R/S | 0.2766 | likely_benign | 0.3313 | benign | -0.042 | Destabilizing | 0.012 | N | 0.269 | neutral | N | 0.376838039 | None | None | N |
R/T | 0.1427 | likely_benign | 0.1646 | benign | 0.187 | Stabilizing | 0.001 | N | 0.231 | neutral | N | 0.420170316 | None | None | N |
R/V | 0.2471 | likely_benign | 0.2784 | benign | 0.427 | Stabilizing | 0.038 | N | 0.301 | neutral | None | None | None | None | N |
R/W | 0.1727 | likely_benign | 0.2046 | benign | -0.066 | Destabilizing | 0.828 | D | 0.205 | neutral | N | 0.486550024 | None | None | N |
R/Y | 0.311 | likely_benign | 0.3397 | benign | 0.322 | Stabilizing | 0.356 | N | 0.24 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.