Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30581 | 91966;91967;91968 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
N2AB | 28940 | 87043;87044;87045 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
N2A | 28013 | 84262;84263;84264 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
N2B | 21516 | 64771;64772;64773 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
Novex-1 | 21641 | 65146;65147;65148 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
Novex-2 | 21708 | 65347;65348;65349 | chr2:178550097;178550096;178550095 | chr2:179414824;179414823;179414822 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.002 | N | 0.381 | 0.211 | 0.568643509186 | gnomAD-4.0.0 | 1.59126E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8583E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1021 | likely_benign | 0.1013 | benign | -0.596 | Destabilizing | 0.003 | N | 0.147 | neutral | N | 0.502120562 | None | None | I |
S/C | 0.1101 | likely_benign | 0.0946 | benign | -0.376 | Destabilizing | 0.978 | D | 0.504 | neutral | N | 0.494887945 | None | None | I |
S/D | 0.6842 | likely_pathogenic | 0.6428 | pathogenic | 0.046 | Stabilizing | 0.593 | D | 0.393 | neutral | None | None | None | None | I |
S/E | 0.6826 | likely_pathogenic | 0.6316 | pathogenic | -0.019 | Destabilizing | 0.593 | D | 0.385 | neutral | None | None | None | None | I |
S/F | 0.1863 | likely_benign | 0.1681 | benign | -1.06 | Destabilizing | 0.002 | N | 0.381 | neutral | N | 0.470106931 | None | None | I |
S/G | 0.1528 | likely_benign | 0.1456 | benign | -0.754 | Destabilizing | 0.228 | N | 0.357 | neutral | None | None | None | None | I |
S/H | 0.4323 | ambiguous | 0.3573 | ambiguous | -1.355 | Destabilizing | 0.716 | D | 0.524 | neutral | None | None | None | None | I |
S/I | 0.2289 | likely_benign | 0.2039 | benign | -0.3 | Destabilizing | 0.264 | N | 0.52 | neutral | None | None | None | None | I |
S/K | 0.8537 | likely_pathogenic | 0.8012 | pathogenic | -0.548 | Destabilizing | 0.593 | D | 0.385 | neutral | None | None | None | None | I |
S/L | 0.1358 | likely_benign | 0.1268 | benign | -0.3 | Destabilizing | 0.129 | N | 0.505 | neutral | None | None | None | None | I |
S/M | 0.1934 | likely_benign | 0.1832 | benign | 0.073 | Stabilizing | 0.836 | D | 0.522 | neutral | None | None | None | None | I |
S/N | 0.2038 | likely_benign | 0.1717 | benign | -0.327 | Destabilizing | 0.593 | D | 0.443 | neutral | None | None | None | None | I |
S/P | 0.9318 | likely_pathogenic | 0.9196 | pathogenic | -0.369 | Destabilizing | 0.921 | D | 0.513 | neutral | D | 0.530539314 | None | None | I |
S/Q | 0.5798 | likely_pathogenic | 0.5101 | ambiguous | -0.597 | Destabilizing | 0.94 | D | 0.468 | neutral | None | None | None | None | I |
S/R | 0.7979 | likely_pathogenic | 0.7309 | pathogenic | -0.409 | Destabilizing | 0.836 | D | 0.511 | neutral | None | None | None | None | I |
S/T | 0.096 | likely_benign | 0.0937 | benign | -0.433 | Destabilizing | 0.003 | N | 0.135 | neutral | N | 0.44243754 | None | None | I |
S/V | 0.2159 | likely_benign | 0.2001 | benign | -0.369 | Destabilizing | 0.129 | N | 0.503 | neutral | None | None | None | None | I |
S/W | 0.4096 | ambiguous | 0.3732 | ambiguous | -1.007 | Destabilizing | 0.951 | D | 0.54 | neutral | None | None | None | None | I |
S/Y | 0.1767 | likely_benign | 0.1572 | benign | -0.747 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.505584941 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.