Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30653 | 92182;92183;92184 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
N2AB | 29012 | 87259;87260;87261 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
N2A | 28085 | 84478;84479;84480 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
N2B | 21588 | 64987;64988;64989 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
Novex-1 | 21713 | 65362;65363;65364 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
Novex-2 | 21780 | 65563;65564;65565 | chr2:178549765;178549764;178549763 | chr2:179414492;179414491;179414490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.638 | N | 0.724 | 0.316 | 0.487137410055 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.129 | likely_benign | 0.1454 | benign | -0.632 | Destabilizing | 0.094 | N | 0.458 | neutral | N | 0.500503858 | None | None | I |
T/C | 0.4932 | ambiguous | 0.5252 | ambiguous | -0.304 | Destabilizing | 0.947 | D | 0.678 | prob.neutral | None | None | None | None | I |
T/D | 0.355 | ambiguous | 0.3914 | ambiguous | -0.244 | Destabilizing | 0.539 | D | 0.658 | neutral | None | None | None | None | I |
T/E | 0.3509 | ambiguous | 0.3917 | ambiguous | -0.251 | Destabilizing | 0.539 | D | 0.667 | neutral | None | None | None | None | I |
T/F | 0.3615 | ambiguous | 0.4136 | ambiguous | -0.639 | Destabilizing | 0.826 | D | 0.749 | deleterious | None | None | None | None | I |
T/G | 0.2578 | likely_benign | 0.2772 | benign | -0.891 | Destabilizing | 0.25 | N | 0.581 | neutral | None | None | None | None | I |
T/H | 0.3365 | likely_benign | 0.3607 | ambiguous | -1.188 | Destabilizing | 0.947 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/I | 0.3104 | likely_benign | 0.3053 | benign | -0.034 | Destabilizing | 0.638 | D | 0.724 | prob.delet. | N | 0.473854454 | None | None | I |
T/K | 0.3158 | likely_benign | 0.3549 | ambiguous | -0.808 | Destabilizing | 0.539 | D | 0.664 | neutral | None | None | None | None | I |
T/L | 0.1434 | likely_benign | 0.1622 | benign | -0.034 | Destabilizing | 0.399 | N | 0.619 | neutral | None | None | None | None | I |
T/M | 0.1294 | likely_benign | 0.1507 | benign | 0.173 | Stabilizing | 0.982 | D | 0.673 | neutral | None | None | None | None | I |
T/N | 0.1499 | likely_benign | 0.1656 | benign | -0.642 | Destabilizing | 0.468 | N | 0.639 | neutral | N | 0.501010837 | None | None | I |
T/P | 0.4944 | ambiguous | 0.582 | pathogenic | -0.201 | Destabilizing | 0.638 | D | 0.726 | prob.delet. | N | 0.505899135 | None | None | I |
T/Q | 0.2989 | likely_benign | 0.3256 | benign | -0.771 | Destabilizing | 0.7 | D | 0.717 | prob.delet. | None | None | None | None | I |
T/R | 0.309 | likely_benign | 0.3484 | ambiguous | -0.581 | Destabilizing | 0.7 | D | 0.73 | prob.delet. | None | None | None | None | I |
T/S | 0.089 | likely_benign | 0.0931 | benign | -0.856 | Destabilizing | 0.002 | N | 0.185 | neutral | N | 0.469343634 | None | None | I |
T/V | 0.2497 | likely_benign | 0.249 | benign | -0.201 | Destabilizing | 0.399 | N | 0.577 | neutral | None | None | None | None | I |
T/W | 0.7268 | likely_pathogenic | 0.7705 | pathogenic | -0.638 | Destabilizing | 0.982 | D | 0.759 | deleterious | None | None | None | None | I |
T/Y | 0.3936 | ambiguous | 0.4382 | ambiguous | -0.42 | Destabilizing | 0.826 | D | 0.741 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.