Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30678 | 92257;92258;92259 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
N2AB | 29037 | 87334;87335;87336 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
N2A | 28110 | 84553;84554;84555 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
N2B | 21613 | 65062;65063;65064 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
Novex-1 | 21738 | 65437;65438;65439 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
Novex-2 | 21805 | 65638;65639;65640 | chr2:178549690;178549689;178549688 | chr2:179414417;179414416;179414415 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.822 | N | 0.547 | 0.179 | 0.151104730317 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02407E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1052 | likely_benign | 0.1197 | benign | -0.311 | Destabilizing | 0.559 | D | 0.477 | neutral | None | None | None | None | N |
S/C | 0.1181 | likely_benign | 0.1318 | benign | 0.076 | Stabilizing | 0.997 | D | 0.7 | prob.neutral | N | 0.49045468 | None | None | N |
S/D | 0.6563 | likely_pathogenic | 0.7407 | pathogenic | -0.521 | Destabilizing | 0.86 | D | 0.545 | neutral | None | None | None | None | N |
S/E | 0.6656 | likely_pathogenic | 0.7274 | pathogenic | -0.348 | Destabilizing | 0.86 | D | 0.511 | neutral | None | None | None | None | N |
S/F | 0.2527 | likely_benign | 0.325 | benign | -0.312 | Destabilizing | 0.978 | D | 0.761 | deleterious | None | None | None | None | N |
S/G | 0.1378 | likely_benign | 0.1599 | benign | -0.685 | Destabilizing | 0.822 | D | 0.496 | neutral | N | 0.486224718 | None | None | N |
S/H | 0.3887 | ambiguous | 0.421 | ambiguous | -1.012 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | N |
S/I | 0.2318 | likely_benign | 0.2739 | benign | 0.623 | Stabilizing | 0.942 | D | 0.738 | prob.delet. | N | 0.484098351 | None | None | N |
S/K | 0.7498 | likely_pathogenic | 0.8132 | pathogenic | 0.312 | Stabilizing | 0.754 | D | 0.493 | neutral | None | None | None | None | N |
S/L | 0.1511 | likely_benign | 0.1844 | benign | 0.623 | Stabilizing | 0.754 | D | 0.633 | neutral | None | None | None | None | N |
S/M | 0.21 | likely_benign | 0.2192 | benign | 0.424 | Stabilizing | 0.994 | D | 0.699 | prob.neutral | None | None | None | None | N |
S/N | 0.1725 | likely_benign | 0.1913 | benign | -0.269 | Destabilizing | 0.822 | D | 0.547 | neutral | N | 0.462476377 | None | None | N |
S/P | 0.8929 | likely_pathogenic | 0.9218 | pathogenic | 0.347 | Stabilizing | 0.978 | D | 0.695 | prob.neutral | None | None | None | None | N |
S/Q | 0.5231 | ambiguous | 0.567 | pathogenic | -0.041 | Destabilizing | 0.956 | D | 0.595 | neutral | None | None | None | None | N |
S/R | 0.6527 | likely_pathogenic | 0.753 | pathogenic | -0.083 | Destabilizing | 0.032 | N | 0.356 | neutral | N | 0.476520323 | None | None | N |
S/T | 0.0927 | likely_benign | 0.1034 | benign | -0.015 | Destabilizing | 0.014 | N | 0.404 | neutral | N | 0.429958527 | None | None | N |
S/V | 0.2271 | likely_benign | 0.2648 | benign | 0.347 | Stabilizing | 0.915 | D | 0.667 | neutral | None | None | None | None | N |
S/W | 0.4311 | ambiguous | 0.5105 | ambiguous | -0.608 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
S/Y | 0.2066 | likely_benign | 0.2534 | benign | -0.08 | Destabilizing | 0.993 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.