Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30689 | 92290;92291;92292 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
N2AB | 29048 | 87367;87368;87369 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
N2A | 28121 | 84586;84587;84588 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
N2B | 21624 | 65095;65096;65097 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
Novex-1 | 21749 | 65470;65471;65472 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
Novex-2 | 21816 | 65671;65672;65673 | chr2:178549657;178549656;178549655 | chr2:179414384;179414383;179414382 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 1.0 | N | 0.628 | 0.355 | 0.294206760003 | gnomAD-4.0.0 | 1.36843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9948E-07 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4694 | ambiguous | 0.5389 | ambiguous | -1.076 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | N | 0.498413489 | None | None | N |
E/C | 0.961 | likely_pathogenic | 0.9688 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/D | 0.7018 | likely_pathogenic | 0.7413 | pathogenic | -1.185 | Destabilizing | 0.999 | D | 0.478 | neutral | N | 0.483752275 | None | None | N |
E/F | 0.9744 | likely_pathogenic | 0.9795 | pathogenic | -0.515 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/G | 0.7385 | likely_pathogenic | 0.7926 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.76 | deleterious | N | 0.512011521 | None | None | N |
E/H | 0.8894 | likely_pathogenic | 0.9127 | pathogenic | -0.849 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/I | 0.7322 | likely_pathogenic | 0.7862 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/K | 0.5275 | ambiguous | 0.6065 | pathogenic | -0.868 | Destabilizing | 0.999 | D | 0.617 | neutral | N | 0.486345941 | None | None | N |
E/L | 0.8434 | likely_pathogenic | 0.8781 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
E/M | 0.8132 | likely_pathogenic | 0.8487 | pathogenic | 0.59 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.7877 | likely_pathogenic | 0.8222 | pathogenic | -1.284 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
E/P | 0.9544 | likely_pathogenic | 0.9706 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.3242 | likely_benign | 0.3449 | ambiguous | -1.123 | Destabilizing | 1.0 | D | 0.628 | neutral | N | 0.477320267 | None | None | N |
E/R | 0.673 | likely_pathogenic | 0.7237 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/S | 0.6115 | likely_pathogenic | 0.6606 | pathogenic | -1.716 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
E/T | 0.598 | likely_pathogenic | 0.6613 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
E/V | 0.5637 | ambiguous | 0.6306 | pathogenic | -0.321 | Destabilizing | 1.0 | D | 0.794 | deleterious | N | 0.490869072 | None | None | N |
E/W | 0.9936 | likely_pathogenic | 0.9954 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
E/Y | 0.9514 | likely_pathogenic | 0.9633 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.