Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30699 | 92320;92321;92322 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
N2AB | 29058 | 87397;87398;87399 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
N2A | 28131 | 84616;84617;84618 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
N2B | 21634 | 65125;65126;65127 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
Novex-1 | 21759 | 65500;65501;65502 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
Novex-2 | 21826 | 65701;65702;65703 | chr2:178549627;178549626;178549625 | chr2:179414354;179414353;179414352 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1248700593 | None | 0.999 | N | 0.603 | 0.432 | 0.283371740733 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/E | rs1248700593 | None | 0.999 | N | 0.603 | 0.432 | 0.283371740733 | gnomAD-4.0.0 | 6.19682E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47616E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4485 | ambiguous | 0.405 | ambiguous | -0.19 | Destabilizing | 0.999 | D | 0.6 | neutral | None | None | None | None | I |
K/C | 0.7326 | likely_pathogenic | 0.6936 | pathogenic | -0.406 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/D | 0.687 | likely_pathogenic | 0.6837 | pathogenic | 0.057 | Stabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
K/E | 0.3194 | likely_benign | 0.3185 | benign | 0.094 | Stabilizing | 0.999 | D | 0.603 | neutral | N | 0.513689058 | None | None | I |
K/F | 0.8725 | likely_pathogenic | 0.8801 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | I |
K/G | 0.6544 | likely_pathogenic | 0.6212 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.556 | neutral | None | None | None | None | I |
K/H | 0.3238 | likely_benign | 0.3288 | benign | -0.643 | Destabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | I |
K/I | 0.4225 | ambiguous | 0.4203 | ambiguous | 0.333 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | I |
K/L | 0.501 | ambiguous | 0.483 | ambiguous | 0.333 | Stabilizing | 1.0 | D | 0.556 | neutral | None | None | None | None | I |
K/M | 0.3459 | ambiguous | 0.3542 | ambiguous | 0.02 | Stabilizing | 1.0 | D | 0.609 | neutral | N | 0.490006472 | None | None | I |
K/N | 0.537 | ambiguous | 0.5469 | ambiguous | -0.02 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.478103508 | None | None | I |
K/P | 0.6951 | likely_pathogenic | 0.6526 | pathogenic | 0.187 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | I |
K/Q | 0.1695 | likely_benign | 0.1659 | benign | -0.116 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.513497056 | None | None | I |
K/R | 0.085 | likely_benign | 0.0856 | benign | -0.139 | Destabilizing | 0.999 | D | 0.528 | neutral | N | 0.47012779 | None | None | I |
K/S | 0.5143 | ambiguous | 0.4912 | ambiguous | -0.519 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | I |
K/T | 0.2446 | likely_benign | 0.2398 | benign | -0.315 | Destabilizing | 1.0 | D | 0.624 | neutral | N | 0.485901414 | None | None | I |
K/V | 0.395 | ambiguous | 0.3913 | ambiguous | 0.187 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
K/W | 0.86 | likely_pathogenic | 0.8654 | pathogenic | -0.343 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
K/Y | 0.7008 | likely_pathogenic | 0.7204 | pathogenic | -0.001 | Destabilizing | 1.0 | D | 0.624 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.