Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30779 | 92560;92561;92562 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
N2AB | 29138 | 87637;87638;87639 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
N2A | 28211 | 84856;84857;84858 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
N2B | 21714 | 65365;65366;65367 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
Novex-1 | 21839 | 65740;65741;65742 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
Novex-2 | 21906 | 65941;65942;65943 | chr2:178549291;178549290;178549289 | chr2:179414018;179414017;179414016 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | rs1289817129 | None | 1.0 | N | 0.709 | 0.341 | 0.520640030592 | gnomAD-4.0.0 | 3.18207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.5457E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7379 | likely_pathogenic | 0.7213 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
R/C | 0.2526 | likely_benign | 0.2374 | benign | -0.456 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
R/D | 0.9146 | likely_pathogenic | 0.9116 | pathogenic | 0.112 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
R/E | 0.7423 | likely_pathogenic | 0.7351 | pathogenic | 0.218 | Stabilizing | 0.999 | D | 0.658 | neutral | None | None | None | None | N |
R/F | 0.774 | likely_pathogenic | 0.7606 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
R/G | 0.6315 | likely_pathogenic | 0.6023 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.494690506 | None | None | N |
R/H | 0.1568 | likely_benign | 0.1469 | benign | -1.094 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
R/I | 0.5576 | ambiguous | 0.5217 | ambiguous | 0.259 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.480055745 | None | None | N |
R/K | 0.2534 | likely_benign | 0.2219 | benign | -0.372 | Destabilizing | 0.997 | D | 0.542 | neutral | N | 0.469242417 | None | None | N |
R/L | 0.5636 | ambiguous | 0.5233 | ambiguous | 0.259 | Stabilizing | 1.0 | D | 0.642 | neutral | None | None | None | None | N |
R/M | 0.6261 | likely_pathogenic | 0.5904 | pathogenic | -0.158 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
R/N | 0.8048 | likely_pathogenic | 0.7953 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
R/P | 0.976 | likely_pathogenic | 0.9718 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
R/Q | 0.2084 | likely_benign | 0.194 | benign | -0.12 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
R/S | 0.7255 | likely_pathogenic | 0.7218 | pathogenic | -0.621 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | N | 0.472474366 | None | None | N |
R/T | 0.5109 | ambiguous | 0.487 | ambiguous | -0.346 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.494871223 | None | None | N |
R/V | 0.5967 | likely_pathogenic | 0.5812 | pathogenic | 0.049 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
R/W | 0.3456 | ambiguous | 0.3179 | benign | -0.238 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
R/Y | 0.5402 | ambiguous | 0.5305 | ambiguous | 0.104 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.