Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30783 | 92572;92573;92574 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
N2AB | 29142 | 87649;87650;87651 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
N2A | 28215 | 84868;84869;84870 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
N2B | 21718 | 65377;65378;65379 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
Novex-1 | 21843 | 65752;65753;65754 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
Novex-2 | 21910 | 65953;65954;65955 | chr2:178549279;178549278;178549277 | chr2:179414006;179414005;179414004 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.971 | N | 0.676 | 0.407 | 0.385578977469 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0988 | likely_benign | 0.1022 | benign | -0.529 | Destabilizing | 0.489 | N | 0.421 | neutral | N | 0.480424593 | None | None | N |
T/C | 0.4112 | ambiguous | 0.4531 | ambiguous | -0.341 | Destabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
T/D | 0.5388 | ambiguous | 0.56 | ambiguous | 0.406 | Stabilizing | 0.956 | D | 0.634 | neutral | None | None | None | None | N |
T/E | 0.4851 | ambiguous | 0.4911 | ambiguous | 0.34 | Stabilizing | 0.956 | D | 0.626 | neutral | None | None | None | None | N |
T/F | 0.2965 | likely_benign | 0.3313 | benign | -0.999 | Destabilizing | 0.978 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/G | 0.2239 | likely_benign | 0.245 | benign | -0.665 | Destabilizing | 0.754 | D | 0.59 | neutral | None | None | None | None | N |
T/H | 0.3412 | ambiguous | 0.3521 | ambiguous | -0.917 | Destabilizing | 0.994 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/I | 0.2297 | likely_benign | 0.2514 | benign | -0.286 | Destabilizing | 0.126 | N | 0.371 | neutral | N | 0.498644207 | None | None | N |
T/K | 0.3712 | ambiguous | 0.3572 | ambiguous | -0.327 | Destabilizing | 0.915 | D | 0.632 | neutral | None | None | None | None | N |
T/L | 0.1123 | likely_benign | 0.1232 | benign | -0.286 | Destabilizing | 0.754 | D | 0.49 | neutral | None | None | None | None | N |
T/M | 0.0951 | likely_benign | 0.1015 | benign | -0.082 | Destabilizing | 0.994 | D | 0.667 | neutral | None | None | None | None | N |
T/N | 0.1369 | likely_benign | 0.1442 | benign | -0.147 | Destabilizing | 0.89 | D | 0.507 | neutral | N | 0.490931525 | None | None | N |
T/P | 0.13 | likely_benign | 0.1289 | benign | -0.339 | Destabilizing | 0.971 | D | 0.676 | prob.neutral | N | 0.484032218 | None | None | N |
T/Q | 0.3021 | likely_benign | 0.304 | benign | -0.356 | Destabilizing | 0.956 | D | 0.679 | prob.neutral | None | None | None | None | N |
T/R | 0.3363 | likely_benign | 0.3243 | benign | -0.078 | Destabilizing | 0.956 | D | 0.674 | neutral | None | None | None | None | N |
T/S | 0.1069 | likely_benign | 0.1136 | benign | -0.433 | Destabilizing | 0.058 | N | 0.491 | neutral | N | 0.474864097 | None | None | N |
T/V | 0.1656 | likely_benign | 0.1829 | benign | -0.339 | Destabilizing | 0.754 | D | 0.42 | neutral | None | None | None | None | N |
T/W | 0.6277 | likely_pathogenic | 0.6274 | pathogenic | -0.961 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
T/Y | 0.3543 | ambiguous | 0.3685 | ambiguous | -0.687 | Destabilizing | 0.993 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.