Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30790 | 92593;92594;92595 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
N2AB | 29149 | 87670;87671;87672 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
N2A | 28222 | 84889;84890;84891 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
N2B | 21725 | 65398;65399;65400 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
Novex-1 | 21850 | 65773;65774;65775 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
Novex-2 | 21917 | 65974;65975;65976 | chr2:178549258;178549257;178549256 | chr2:179413985;179413984;179413983 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs371765494 | -1.089 | 0.999 | N | 0.596 | 0.263 | None | gnomAD-2.1.1 | 8.03E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/K | rs371765494 | -1.089 | 0.999 | N | 0.596 | 0.263 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/K | rs371765494 | -1.089 | 0.999 | N | 0.596 | 0.263 | None | gnomAD-4.0.0 | 4.33763E-06 | None | None | None | None | N | None | 1.33479E-05 | 3.33411E-05 | None | 0 | 2.22886E-05 | None | 0 | 0 | 1.69512E-06 | 0 | 1.60108E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3341 | likely_benign | 0.332 | benign | -1.113 | Destabilizing | 0.999 | D | 0.673 | neutral | N | 0.486069679 | None | None | N |
E/C | 0.9109 | likely_pathogenic | 0.9183 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
E/D | 0.2265 | likely_benign | 0.2359 | benign | -1.372 | Destabilizing | 0.999 | D | 0.467 | neutral | N | 0.47124388 | None | None | N |
E/F | 0.8531 | likely_pathogenic | 0.8645 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
E/G | 0.5087 | ambiguous | 0.5055 | ambiguous | -1.532 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.491109335 | None | None | N |
E/H | 0.7697 | likely_pathogenic | 0.7849 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.5424 | ambiguous | 0.5307 | ambiguous | 0.06 | Stabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
E/K | 0.574 | likely_pathogenic | 0.5545 | ambiguous | -1.228 | Destabilizing | 0.999 | D | 0.596 | neutral | N | 0.471039616 | None | None | N |
E/L | 0.6524 | likely_pathogenic | 0.6619 | pathogenic | 0.06 | Stabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
E/M | 0.6089 | likely_pathogenic | 0.6275 | pathogenic | 0.711 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/N | 0.5184 | ambiguous | 0.5391 | ambiguous | -1.625 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/P | 0.9388 | likely_pathogenic | 0.9279 | pathogenic | -0.311 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/Q | 0.3127 | likely_benign | 0.3018 | benign | -1.424 | Destabilizing | 1.0 | D | 0.63 | neutral | N | 0.469749396 | None | None | N |
E/R | 0.6951 | likely_pathogenic | 0.6894 | pathogenic | -0.947 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/S | 0.3784 | ambiguous | 0.3905 | ambiguous | -2.099 | Highly Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
E/T | 0.3797 | ambiguous | 0.3866 | ambiguous | -1.745 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/V | 0.3995 | ambiguous | 0.3865 | ambiguous | -0.311 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.470789808 | None | None | N |
E/W | 0.9493 | likely_pathogenic | 0.9517 | pathogenic | -0.317 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Y | 0.7718 | likely_pathogenic | 0.7809 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.