Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30796 | 92611;92612;92613 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
N2AB | 29155 | 87688;87689;87690 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
N2A | 28228 | 84907;84908;84909 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
N2B | 21731 | 65416;65417;65418 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
Novex-1 | 21856 | 65791;65792;65793 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
Novex-2 | 21923 | 65992;65993;65994 | chr2:178549240;178549239;178549238 | chr2:179413967;179413966;179413965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1698372447 | None | 0.454 | N | 0.745 | 0.203 | 0.488827753106 | gnomAD-4.0.0 | 4.77336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.32131E-05 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs773266486 | -1.491 | 0.454 | N | 0.599 | 0.192 | 0.480801007081 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.3711 | ambiguous | 0.3924 | ambiguous | -2.546 | Highly Destabilizing | 0.688 | D | 0.719 | prob.delet. | None | None | None | None | N |
M/C | 0.6627 | likely_pathogenic | 0.6805 | pathogenic | -1.997 | Destabilizing | 0.998 | D | 0.706 | prob.neutral | None | None | None | None | N |
M/D | 0.9372 | likely_pathogenic | 0.9415 | pathogenic | -2.359 | Highly Destabilizing | 0.991 | D | 0.745 | deleterious | None | None | None | None | N |
M/E | 0.6437 | likely_pathogenic | 0.6349 | pathogenic | -2.224 | Highly Destabilizing | 0.991 | D | 0.715 | prob.delet. | None | None | None | None | N |
M/F | 0.3209 | likely_benign | 0.322 | benign | -1.122 | Destabilizing | 0.842 | D | 0.679 | prob.neutral | None | None | None | None | N |
M/G | 0.6956 | likely_pathogenic | 0.7091 | pathogenic | -2.913 | Highly Destabilizing | 0.991 | D | 0.709 | prob.delet. | None | None | None | None | N |
M/H | 0.5049 | ambiguous | 0.5061 | ambiguous | -2.373 | Highly Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
M/I | 0.5449 | ambiguous | 0.5703 | pathogenic | -1.507 | Destabilizing | 0.454 | N | 0.745 | deleterious | N | 0.414063568 | None | None | N |
M/K | 0.1821 | likely_benign | 0.1706 | benign | -1.742 | Destabilizing | 0.891 | D | 0.689 | prob.neutral | N | 0.387530328 | None | None | N |
M/L | 0.1691 | likely_benign | 0.182 | benign | -1.507 | Destabilizing | 0.002 | N | 0.308 | neutral | N | 0.426550076 | None | None | N |
M/N | 0.642 | likely_pathogenic | 0.6584 | pathogenic | -1.824 | Destabilizing | 0.991 | D | 0.723 | prob.delet. | None | None | None | None | N |
M/P | 0.9939 | likely_pathogenic | 0.9953 | pathogenic | -1.837 | Destabilizing | 0.991 | D | 0.728 | prob.delet. | None | None | None | None | N |
M/Q | 0.2359 | likely_benign | 0.234 | benign | -1.717 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
M/R | 0.1865 | likely_benign | 0.1774 | benign | -1.505 | Destabilizing | 0.966 | D | 0.712 | prob.delet. | N | 0.402979783 | None | None | N |
M/S | 0.3493 | ambiguous | 0.3702 | ambiguous | -2.338 | Highly Destabilizing | 0.915 | D | 0.689 | prob.neutral | None | None | None | None | N |
M/T | 0.1881 | likely_benign | 0.1952 | benign | -2.114 | Highly Destabilizing | 0.891 | D | 0.701 | prob.neutral | N | 0.396669886 | None | None | N |
M/V | 0.1638 | likely_benign | 0.1646 | benign | -1.837 | Destabilizing | 0.454 | N | 0.599 | neutral | N | 0.429974383 | None | None | N |
M/W | 0.6635 | likely_pathogenic | 0.6519 | pathogenic | -1.36 | Destabilizing | 0.998 | D | 0.681 | prob.neutral | None | None | None | None | N |
M/Y | 0.5891 | likely_pathogenic | 0.5957 | pathogenic | -1.43 | Destabilizing | 0.974 | D | 0.722 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.