Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30847 | 92764;92765;92766 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
N2AB | 29206 | 87841;87842;87843 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
N2A | 28279 | 85060;85061;85062 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
N2B | 21782 | 65569;65570;65571 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
Novex-1 | 21907 | 65944;65945;65946 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
Novex-2 | 21974 | 66145;66146;66147 | chr2:178549087;178549086;178549085 | chr2:179413814;179413813;179413812 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/S | rs906140300 | None | 0.942 | N | 0.602 | 0.368 | 0.473065174198 | gnomAD-4.0.0 | 2.05255E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6983E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5175 | ambiguous | 0.5421 | ambiguous | -1.045 | Destabilizing | 0.86 | D | 0.493 | neutral | None | None | None | None | I |
F/C | 0.3976 | ambiguous | 0.3761 | ambiguous | -0.295 | Destabilizing | 0.997 | D | 0.623 | neutral | N | 0.473388725 | None | None | I |
F/D | 0.69 | likely_pathogenic | 0.7238 | pathogenic | 0.816 | Stabilizing | 0.993 | D | 0.661 | neutral | None | None | None | None | I |
F/E | 0.7971 | likely_pathogenic | 0.8178 | pathogenic | 0.794 | Stabilizing | 0.978 | D | 0.662 | neutral | None | None | None | None | I |
F/G | 0.733 | likely_pathogenic | 0.7486 | pathogenic | -1.246 | Destabilizing | 0.978 | D | 0.643 | neutral | None | None | None | None | I |
F/H | 0.5399 | ambiguous | 0.5252 | ambiguous | 0.146 | Stabilizing | 0.956 | D | 0.572 | neutral | None | None | None | None | I |
F/I | 0.3867 | ambiguous | 0.39 | ambiguous | -0.536 | Destabilizing | 0.942 | D | 0.515 | neutral | N | 0.456629761 | None | None | I |
F/K | 0.8473 | likely_pathogenic | 0.8562 | pathogenic | -0.089 | Destabilizing | 0.956 | D | 0.666 | neutral | None | None | None | None | I |
F/L | 0.899 | likely_pathogenic | 0.9039 | pathogenic | -0.536 | Destabilizing | 0.698 | D | 0.47 | neutral | N | 0.466980041 | None | None | I |
F/M | 0.5909 | likely_pathogenic | 0.6004 | pathogenic | -0.35 | Destabilizing | 0.998 | D | 0.534 | neutral | None | None | None | None | I |
F/N | 0.5583 | ambiguous | 0.5745 | pathogenic | 0.009 | Stabilizing | 0.978 | D | 0.669 | neutral | None | None | None | None | I |
F/P | 0.9835 | likely_pathogenic | 0.9868 | pathogenic | -0.686 | Destabilizing | 0.993 | D | 0.655 | neutral | None | None | None | None | I |
F/Q | 0.7316 | likely_pathogenic | 0.7379 | pathogenic | -0.075 | Destabilizing | 0.978 | D | 0.658 | neutral | None | None | None | None | I |
F/R | 0.711 | likely_pathogenic | 0.7367 | pathogenic | 0.411 | Stabilizing | 0.978 | D | 0.663 | neutral | None | None | None | None | I |
F/S | 0.3242 | likely_benign | 0.3486 | ambiguous | -0.717 | Destabilizing | 0.942 | D | 0.602 | neutral | N | 0.382246646 | None | None | I |
F/T | 0.4529 | ambiguous | 0.4802 | ambiguous | -0.649 | Destabilizing | 0.978 | D | 0.608 | neutral | None | None | None | None | I |
F/V | 0.3587 | ambiguous | 0.3603 | ambiguous | -0.686 | Destabilizing | 0.822 | D | 0.549 | neutral | N | 0.453589456 | None | None | I |
F/W | 0.4821 | ambiguous | 0.4819 | ambiguous | -0.302 | Destabilizing | 0.994 | D | 0.524 | neutral | None | None | None | None | I |
F/Y | 0.1376 | likely_benign | 0.1311 | benign | -0.281 | Destabilizing | 0.014 | N | 0.265 | neutral | N | 0.3163898 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.