Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30858 | 92797;92798;92799 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
N2AB | 29217 | 87874;87875;87876 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
N2A | 28290 | 85093;85094;85095 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
N2B | 21793 | 65602;65603;65604 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
Novex-1 | 21918 | 65977;65978;65979 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
Novex-2 | 21985 | 66178;66179;66180 | chr2:178549054;178549053;178549052 | chr2:179413781;179413780;179413779 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs1463927651 | -3.402 | 0.822 | D | 0.719 | 0.487 | 0.83593546449 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/T | rs1463927651 | -3.402 | 0.822 | D | 0.719 | 0.487 | 0.83593546449 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/T | rs1463927651 | -3.402 | 0.822 | D | 0.719 | 0.487 | 0.83593546449 | gnomAD-4.0.0 | 4.33767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69515E-06 | 5.48944E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7725 | likely_pathogenic | 0.7286 | pathogenic | -3.045 | Highly Destabilizing | 0.754 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/C | 0.9567 | likely_pathogenic | 0.9525 | pathogenic | -2.163 | Highly Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
I/D | 0.9989 | likely_pathogenic | 0.998 | pathogenic | -3.767 | Highly Destabilizing | 0.993 | D | 0.881 | deleterious | None | None | None | None | N |
I/E | 0.9956 | likely_pathogenic | 0.9929 | pathogenic | -3.447 | Highly Destabilizing | 0.978 | D | 0.877 | deleterious | None | None | None | None | N |
I/F | 0.7467 | likely_pathogenic | 0.7385 | pathogenic | -1.832 | Destabilizing | 0.942 | D | 0.635 | neutral | D | 0.524277469 | None | None | N |
I/G | 0.9894 | likely_pathogenic | 0.9846 | pathogenic | -3.637 | Highly Destabilizing | 0.978 | D | 0.877 | deleterious | None | None | None | None | N |
I/H | 0.9965 | likely_pathogenic | 0.9947 | pathogenic | -3.282 | Highly Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | N |
I/K | 0.9925 | likely_pathogenic | 0.9888 | pathogenic | -2.411 | Highly Destabilizing | 0.978 | D | 0.877 | deleterious | None | None | None | None | N |
I/L | 0.2436 | likely_benign | 0.218 | benign | -1.247 | Destabilizing | 0.294 | N | 0.317 | neutral | N | 0.481486212 | None | None | N |
I/M | 0.3248 | likely_benign | 0.3078 | benign | -1.396 | Destabilizing | 0.942 | D | 0.647 | neutral | N | 0.503450962 | None | None | N |
I/N | 0.9885 | likely_pathogenic | 0.9811 | pathogenic | -3.128 | Highly Destabilizing | 0.99 | D | 0.896 | deleterious | D | 0.535887264 | None | None | N |
I/P | 0.9841 | likely_pathogenic | 0.9771 | pathogenic | -1.84 | Destabilizing | 0.993 | D | 0.891 | deleterious | None | None | None | None | N |
I/Q | 0.9937 | likely_pathogenic | 0.9901 | pathogenic | -2.786 | Highly Destabilizing | 0.993 | D | 0.895 | deleterious | None | None | None | None | N |
I/R | 0.9876 | likely_pathogenic | 0.9814 | pathogenic | -2.385 | Highly Destabilizing | 0.978 | D | 0.897 | deleterious | None | None | None | None | N |
I/S | 0.9519 | likely_pathogenic | 0.9342 | pathogenic | -3.647 | Highly Destabilizing | 0.942 | D | 0.839 | deleterious | D | 0.535887264 | None | None | N |
I/T | 0.6301 | likely_pathogenic | 0.5623 | ambiguous | -3.173 | Highly Destabilizing | 0.822 | D | 0.719 | prob.delet. | D | 0.535633774 | None | None | N |
I/V | 0.0935 | likely_benign | 0.0944 | benign | -1.84 | Destabilizing | 0.006 | N | 0.196 | neutral | N | 0.381062928 | None | None | N |
I/W | 0.994 | likely_pathogenic | 0.9933 | pathogenic | -2.247 | Highly Destabilizing | 0.998 | D | 0.841 | deleterious | None | None | None | None | N |
I/Y | 0.985 | likely_pathogenic | 0.9827 | pathogenic | -2.09 | Highly Destabilizing | 0.978 | D | 0.748 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.