Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30882 | 92869;92870;92871 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
N2AB | 29241 | 87946;87947;87948 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
N2A | 28314 | 85165;85166;85167 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
N2B | 21817 | 65674;65675;65676 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
Novex-1 | 21942 | 66049;66050;66051 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
Novex-2 | 22009 | 66250;66251;66252 | chr2:178548982;178548981;178548980 | chr2:179413709;179413708;179413707 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | None | None | 0.241 | N | 0.32 | 0.286 | 0.388174495139 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1166 | likely_benign | 0.1136 | benign | -0.811 | Destabilizing | 0.948 | D | 0.481 | neutral | N | 0.484138031 | None | None | N |
T/C | 0.4368 | ambiguous | 0.4362 | ambiguous | -0.483 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
T/D | 0.6221 | likely_pathogenic | 0.5993 | pathogenic | 0.284 | Stabilizing | 0.998 | D | 0.631 | neutral | None | None | None | None | N |
T/E | 0.4272 | ambiguous | 0.4001 | ambiguous | 0.283 | Stabilizing | 0.995 | D | 0.601 | neutral | None | None | None | None | N |
T/F | 0.3814 | ambiguous | 0.3874 | ambiguous | -0.998 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/G | 0.4783 | ambiguous | 0.4784 | ambiguous | -1.047 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
T/H | 0.3717 | ambiguous | 0.3542 | ambiguous | -1.28 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/I | 0.1443 | likely_benign | 0.1455 | benign | -0.278 | Destabilizing | 0.956 | D | 0.547 | neutral | N | 0.495645694 | None | None | N |
T/K | 0.3183 | likely_benign | 0.2886 | benign | -0.483 | Destabilizing | 0.956 | D | 0.549 | neutral | N | 0.473742777 | None | None | N |
T/L | 0.1347 | likely_benign | 0.1348 | benign | -0.278 | Destabilizing | 0.967 | D | 0.501 | neutral | None | None | None | None | N |
T/M | 0.0918 | likely_benign | 0.0954 | benign | -0.077 | Destabilizing | 0.999 | D | 0.643 | neutral | None | None | None | None | N |
T/N | 0.2253 | likely_benign | 0.2166 | benign | -0.45 | Destabilizing | 0.998 | D | 0.515 | neutral | None | None | None | None | N |
T/P | 0.3606 | ambiguous | 0.3455 | ambiguous | -0.424 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.49831872 | None | None | N |
T/Q | 0.2992 | likely_benign | 0.2808 | benign | -0.57 | Destabilizing | 0.995 | D | 0.642 | neutral | None | None | None | None | N |
T/R | 0.2664 | likely_benign | 0.2505 | benign | -0.313 | Destabilizing | 0.241 | N | 0.32 | neutral | N | 0.478377586 | None | None | N |
T/S | 0.1773 | likely_benign | 0.1751 | benign | -0.795 | Destabilizing | 0.989 | D | 0.449 | neutral | N | 0.474578924 | None | None | N |
T/V | 0.1083 | likely_benign | 0.1115 | benign | -0.424 | Destabilizing | 0.437 | N | 0.367 | neutral | None | None | None | None | N |
T/W | 0.7668 | likely_pathogenic | 0.767 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/Y | 0.4643 | ambiguous | 0.4642 | ambiguous | -0.668 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.