Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30884 | 92875;92876;92877 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
N2AB | 29243 | 87952;87953;87954 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
N2A | 28316 | 85171;85172;85173 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
N2B | 21819 | 65680;65681;65682 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
Novex-1 | 21944 | 66055;66056;66057 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
Novex-2 | 22011 | 66256;66257;66258 | chr2:178548976;178548975;178548974 | chr2:179413703;179413702;179413701 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1698294296 | None | 0.891 | N | 0.448 | 0.282 | 0.314417295294 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs1698294296 | None | 0.891 | N | 0.448 | 0.282 | 0.314417295294 | gnomAD-4.0.0 | 1.23933E-06 | None | None | None | None | N | None | 2.67023E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0785 | likely_benign | 0.0812 | benign | -0.532 | Destabilizing | 0.454 | N | 0.391 | neutral | D | 0.526602427 | None | None | N |
T/C | 0.3489 | ambiguous | 0.3969 | ambiguous | -0.308 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
T/D | 0.3667 | ambiguous | 0.3755 | ambiguous | 0.102 | Stabilizing | 0.915 | D | 0.546 | neutral | None | None | None | None | N |
T/E | 0.262 | likely_benign | 0.2658 | benign | 0.046 | Stabilizing | 0.842 | D | 0.465 | neutral | None | None | None | None | N |
T/F | 0.2722 | likely_benign | 0.3099 | benign | -0.903 | Destabilizing | 0.974 | D | 0.608 | neutral | None | None | None | None | N |
T/G | 0.1787 | likely_benign | 0.1968 | benign | -0.704 | Destabilizing | 0.915 | D | 0.527 | neutral | None | None | None | None | N |
T/H | 0.2351 | likely_benign | 0.2597 | benign | -0.997 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
T/I | 0.1513 | likely_benign | 0.1823 | benign | -0.188 | Destabilizing | 0.669 | D | 0.463 | neutral | N | 0.489592079 | None | None | N |
T/K | 0.1401 | likely_benign | 0.1445 | benign | -0.484 | Destabilizing | 0.029 | N | 0.239 | neutral | None | None | None | None | N |
T/L | 0.0935 | likely_benign | 0.1059 | benign | -0.188 | Destabilizing | 0.525 | D | 0.432 | neutral | None | None | None | None | N |
T/M | 0.0842 | likely_benign | 0.0906 | benign | 0.041 | Stabilizing | 0.974 | D | 0.557 | neutral | None | None | None | None | N |
T/N | 0.1168 | likely_benign | 0.121 | benign | -0.289 | Destabilizing | 0.891 | D | 0.448 | neutral | N | 0.477764794 | None | None | N |
T/P | 0.0883 | likely_benign | 0.0853 | benign | -0.272 | Destabilizing | 0.989 | D | 0.568 | neutral | N | 0.495279442 | None | None | N |
T/Q | 0.1819 | likely_benign | 0.1913 | benign | -0.507 | Destabilizing | 0.949 | D | 0.573 | neutral | None | None | None | None | N |
T/R | 0.1402 | likely_benign | 0.1492 | benign | -0.207 | Destabilizing | 0.728 | D | 0.511 | neutral | None | None | None | None | N |
T/S | 0.103 | likely_benign | 0.1072 | benign | -0.531 | Destabilizing | 0.801 | D | 0.418 | neutral | N | 0.46947692 | None | None | N |
T/V | 0.1201 | likely_benign | 0.141 | benign | -0.272 | Destabilizing | 0.007 | N | 0.159 | neutral | None | None | None | None | N |
T/W | 0.5873 | likely_pathogenic | 0.6333 | pathogenic | -0.871 | Destabilizing | 0.998 | D | 0.617 | neutral | None | None | None | None | N |
T/Y | 0.3264 | likely_benign | 0.3599 | ambiguous | -0.609 | Destabilizing | 0.991 | D | 0.612 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.