Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30891 | 92896;92897;92898 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
N2AB | 29250 | 87973;87974;87975 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
N2A | 28323 | 85192;85193;85194 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
N2B | 21826 | 65701;65702;65703 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
Novex-1 | 21951 | 66076;66077;66078 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
Novex-2 | 22018 | 66277;66278;66279 | chr2:178548955;178548954;178548953 | chr2:179413682;179413681;179413680 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.801 | N | 0.471 | 0.193 | 0.227260227426 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1246 | likely_benign | 0.1299 | benign | -0.953 | Destabilizing | 0.625 | D | 0.416 | neutral | N | 0.478663393 | None | None | N |
E/C | 0.7746 | likely_pathogenic | 0.7881 | pathogenic | -0.472 | Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | N |
E/D | 0.1365 | likely_benign | 0.1346 | benign | -1.046 | Destabilizing | 0.801 | D | 0.38 | neutral | N | 0.46844595 | None | None | N |
E/F | 0.6716 | likely_pathogenic | 0.6822 | pathogenic | -0.427 | Destabilizing | 0.949 | D | 0.609 | neutral | None | None | None | None | N |
E/G | 0.1885 | likely_benign | 0.1942 | benign | -1.313 | Destabilizing | 0.801 | D | 0.564 | neutral | N | 0.496540612 | None | None | N |
E/H | 0.4891 | ambiguous | 0.4924 | ambiguous | -0.714 | Destabilizing | 0.037 | N | 0.201 | neutral | None | None | None | None | N |
E/I | 0.2613 | likely_benign | 0.264 | benign | 0.029 | Stabilizing | 0.728 | D | 0.563 | neutral | None | None | None | None | N |
E/K | 0.2019 | likely_benign | 0.2046 | benign | -0.599 | Destabilizing | 0.801 | D | 0.405 | neutral | N | 0.48636917 | None | None | N |
E/L | 0.3218 | likely_benign | 0.3236 | benign | 0.029 | Stabilizing | 0.007 | N | 0.353 | neutral | None | None | None | None | N |
E/M | 0.3283 | likely_benign | 0.3422 | ambiguous | 0.499 | Stabilizing | 0.949 | D | 0.603 | neutral | None | None | None | None | N |
E/N | 0.2123 | likely_benign | 0.2066 | benign | -1.049 | Destabilizing | 0.842 | D | 0.448 | neutral | None | None | None | None | N |
E/P | 0.5656 | likely_pathogenic | 0.5313 | ambiguous | -0.278 | Destabilizing | 0.991 | D | 0.549 | neutral | None | None | None | None | N |
E/Q | 0.1613 | likely_benign | 0.1664 | benign | -0.926 | Destabilizing | 0.801 | D | 0.471 | neutral | N | 0.514806565 | None | None | N |
E/R | 0.347 | ambiguous | 0.3646 | ambiguous | -0.347 | Destabilizing | 0.949 | D | 0.457 | neutral | None | None | None | None | N |
E/S | 0.1858 | likely_benign | 0.1936 | benign | -1.375 | Destabilizing | 0.842 | D | 0.387 | neutral | None | None | None | None | N |
E/T | 0.1644 | likely_benign | 0.1689 | benign | -1.074 | Destabilizing | 0.915 | D | 0.487 | neutral | None | None | None | None | N |
E/V | 0.1601 | likely_benign | 0.1633 | benign | -0.278 | Destabilizing | 0.669 | D | 0.496 | neutral | N | 0.492844082 | None | None | N |
E/W | 0.8801 | likely_pathogenic | 0.8864 | pathogenic | -0.159 | Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | N |
E/Y | 0.5464 | ambiguous | 0.5591 | ambiguous | -0.169 | Destabilizing | 0.949 | D | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.