Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30897 | 92914;92915;92916 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
N2AB | 29256 | 87991;87992;87993 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
N2A | 28329 | 85210;85211;85212 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
N2B | 21832 | 65719;65720;65721 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
Novex-1 | 21957 | 66094;66095;66096 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
Novex-2 | 22024 | 66295;66296;66297 | chr2:178548937;178548936;178548935 | chr2:179413664;179413663;179413662 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.989 | N | 0.634 | 0.331 | 0.257292322809 | gnomAD-4.0.0 | 1.59107E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0966 | likely_benign | 0.095 | benign | -1.03 | Destabilizing | 0.96 | D | 0.582 | neutral | None | None | None | None | N |
S/C | 0.067 | likely_benign | 0.0712 | benign | -1.059 | Destabilizing | 0.241 | N | 0.581 | neutral | N | 0.464185744 | None | None | N |
S/D | 0.7338 | likely_pathogenic | 0.7091 | pathogenic | -2.116 | Highly Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
S/E | 0.7719 | likely_pathogenic | 0.7348 | pathogenic | -1.899 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/F | 0.2297 | likely_benign | 0.2492 | benign | -0.718 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
S/G | 0.128 | likely_benign | 0.1288 | benign | -1.416 | Destabilizing | 0.989 | D | 0.634 | neutral | N | 0.494904316 | None | None | N |
S/H | 0.4531 | ambiguous | 0.4201 | ambiguous | -1.66 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
S/I | 0.2635 | likely_benign | 0.2613 | benign | -0.042 | Destabilizing | 0.997 | D | 0.812 | deleterious | N | 0.503280063 | None | None | N |
S/K | 0.852 | likely_pathogenic | 0.812 | pathogenic | -0.618 | Destabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
S/L | 0.1525 | likely_benign | 0.155 | benign | -0.042 | Destabilizing | 0.983 | D | 0.767 | deleterious | None | None | None | None | N |
S/M | 0.2259 | likely_benign | 0.2356 | benign | -0.291 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
S/N | 0.2727 | likely_benign | 0.2495 | benign | -1.427 | Destabilizing | 0.999 | D | 0.678 | prob.neutral | N | 0.486003546 | None | None | N |
S/P | 0.9752 | likely_pathogenic | 0.9783 | pathogenic | -0.339 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
S/Q | 0.6172 | likely_pathogenic | 0.5644 | pathogenic | -1.124 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
S/R | 0.6991 | likely_pathogenic | 0.6249 | pathogenic | -0.964 | Destabilizing | 0.999 | D | 0.791 | deleterious | N | 0.447482708 | None | None | N |
S/T | 0.1039 | likely_benign | 0.1019 | benign | -1.012 | Destabilizing | 0.989 | D | 0.623 | neutral | N | 0.491273558 | None | None | N |
S/V | 0.2559 | likely_benign | 0.2535 | benign | -0.339 | Destabilizing | 0.995 | D | 0.793 | deleterious | None | None | None | None | N |
S/W | 0.3784 | ambiguous | 0.3807 | ambiguous | -1.062 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
S/Y | 0.2392 | likely_benign | 0.2405 | benign | -0.615 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.