Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30910 | 92953;92954;92955 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
N2AB | 29269 | 88030;88031;88032 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
N2A | 28342 | 85249;85250;85251 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
N2B | 21845 | 65758;65759;65760 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
Novex-1 | 21970 | 66133;66134;66135 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
Novex-2 | 22037 | 66334;66335;66336 | chr2:178548898;178548897;178548896 | chr2:179413625;179413624;179413623 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1698264334 | None | 0.002 | N | 0.489 | 0.13 | 0.181679512989 | gnomAD-4.0.0 | 1.59119E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1992 | likely_benign | 0.1699 | benign | -1.562 | Destabilizing | None | N | 0.276 | neutral | N | 0.47771711 | None | None | N |
V/C | 0.7541 | likely_pathogenic | 0.7321 | pathogenic | -1.164 | Destabilizing | 0.685 | D | 0.639 | neutral | None | None | None | None | N |
V/D | 0.6064 | likely_pathogenic | 0.5723 | pathogenic | -1.577 | Destabilizing | 0.221 | N | 0.702 | prob.delet. | None | None | None | None | N |
V/E | 0.5712 | likely_pathogenic | 0.5238 | ambiguous | -1.469 | Destabilizing | 0.058 | N | 0.663 | prob.neutral | N | 0.488934181 | None | None | N |
V/F | 0.2534 | likely_benign | 0.233 | benign | -0.947 | Destabilizing | 0.221 | N | 0.759 | deleterious | None | None | None | None | N |
V/G | 0.2911 | likely_benign | 0.2746 | benign | -1.999 | Destabilizing | 0.03 | N | 0.627 | neutral | N | 0.48932973 | None | None | N |
V/H | 0.8246 | likely_pathogenic | 0.7953 | pathogenic | -1.684 | Destabilizing | 0.869 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/I | 0.0822 | likely_benign | 0.0813 | benign | -0.415 | Destabilizing | 0.016 | N | 0.597 | neutral | None | None | None | None | N |
V/K | 0.7335 | likely_pathogenic | 0.7032 | pathogenic | -1.342 | Destabilizing | 0.075 | N | 0.657 | prob.neutral | None | None | None | None | N |
V/L | 0.2145 | likely_benign | 0.1948 | benign | -0.415 | Destabilizing | 0.005 | N | 0.529 | neutral | N | 0.4469142 | None | None | N |
V/M | 0.1666 | likely_benign | 0.1552 | benign | -0.446 | Destabilizing | 0.002 | N | 0.489 | neutral | N | 0.502903556 | None | None | N |
V/N | 0.4854 | ambiguous | 0.4359 | ambiguous | -1.348 | Destabilizing | 0.366 | N | 0.705 | prob.delet. | None | None | None | None | N |
V/P | 0.7159 | likely_pathogenic | 0.7053 | pathogenic | -0.764 | Destabilizing | 0.221 | N | 0.689 | prob.delet. | None | None | None | None | N |
V/Q | 0.6537 | likely_pathogenic | 0.6032 | pathogenic | -1.341 | Destabilizing | 0.366 | N | 0.689 | prob.delet. | None | None | None | None | N |
V/R | 0.7298 | likely_pathogenic | 0.6912 | pathogenic | -1.056 | Destabilizing | 0.221 | N | 0.705 | prob.delet. | None | None | None | None | N |
V/S | 0.3324 | likely_benign | 0.2892 | benign | -1.945 | Destabilizing | 0.039 | N | 0.607 | neutral | None | None | None | None | N |
V/T | 0.2456 | likely_benign | 0.2092 | benign | -1.705 | Destabilizing | 0.001 | N | 0.335 | neutral | None | None | None | None | N |
V/W | 0.8953 | likely_pathogenic | 0.8848 | pathogenic | -1.309 | Destabilizing | 0.869 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/Y | 0.6839 | likely_pathogenic | 0.6485 | pathogenic | -0.934 | Destabilizing | 0.366 | N | 0.736 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.