Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30914 | 92965;92966;92967 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
N2AB | 29273 | 88042;88043;88044 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
N2A | 28346 | 85261;85262;85263 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
N2B | 21849 | 65770;65771;65772 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
Novex-1 | 21974 | 66145;66146;66147 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
Novex-2 | 22041 | 66346;66347;66348 | chr2:178548886;178548885;178548884 | chr2:179413613;179413612;179413611 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | rs951807675 | -2.554 | 0.791 | N | 0.583 | 0.33 | 0.801104325881 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.3687 | ambiguous | 0.3728 | ambiguous | -2.082 | Highly Destabilizing | 0.338 | N | 0.423 | neutral | None | None | None | None | N |
I/C | 0.6786 | likely_pathogenic | 0.6864 | pathogenic | -1.483 | Destabilizing | 0.995 | D | 0.529 | neutral | None | None | None | None | N |
I/D | 0.8743 | likely_pathogenic | 0.8725 | pathogenic | -1.745 | Destabilizing | 0.982 | D | 0.717 | prob.delet. | None | None | None | None | N |
I/E | 0.6915 | likely_pathogenic | 0.6971 | pathogenic | -1.563 | Destabilizing | 0.946 | D | 0.697 | prob.delet. | None | None | None | None | N |
I/F | 0.2 | likely_benign | 0.2083 | benign | -1.144 | Destabilizing | 0.868 | D | 0.494 | neutral | N | 0.508350314 | None | None | N |
I/G | 0.752 | likely_pathogenic | 0.7648 | pathogenic | -2.57 | Highly Destabilizing | 0.834 | D | 0.687 | prob.delet. | None | None | None | None | N |
I/H | 0.6343 | likely_pathogenic | 0.6415 | pathogenic | -1.669 | Destabilizing | 0.995 | D | 0.705 | prob.delet. | None | None | None | None | N |
I/K | 0.5618 | ambiguous | 0.5841 | pathogenic | -1.546 | Destabilizing | 0.946 | D | 0.697 | prob.delet. | None | None | None | None | N |
I/L | 0.1473 | likely_benign | 0.1554 | benign | -0.712 | Destabilizing | 0.068 | N | 0.387 | neutral | N | 0.477854048 | None | None | N |
I/M | 0.12 | likely_benign | 0.1283 | benign | -0.726 | Destabilizing | 0.93 | D | 0.505 | neutral | N | 0.501058982 | None | None | N |
I/N | 0.5102 | ambiguous | 0.508 | ambiguous | -1.796 | Destabilizing | 0.976 | D | 0.701 | prob.delet. | N | 0.481916894 | None | None | N |
I/P | 0.873 | likely_pathogenic | 0.8792 | pathogenic | -1.145 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/Q | 0.5485 | ambiguous | 0.5544 | ambiguous | -1.702 | Destabilizing | 0.982 | D | 0.706 | prob.delet. | None | None | None | None | N |
I/R | 0.4856 | ambiguous | 0.5093 | ambiguous | -1.216 | Destabilizing | 0.946 | D | 0.696 | prob.delet. | None | None | None | None | N |
I/S | 0.4399 | ambiguous | 0.4412 | ambiguous | -2.534 | Highly Destabilizing | 0.791 | D | 0.583 | neutral | N | 0.481156425 | None | None | N |
I/T | 0.2909 | likely_benign | 0.2911 | benign | -2.195 | Highly Destabilizing | 0.651 | D | 0.583 | neutral | N | 0.49365022 | None | None | N |
I/V | 0.0578 | likely_benign | 0.0582 | benign | -1.145 | Destabilizing | 0.001 | N | 0.158 | neutral | N | 0.392827078 | None | None | N |
I/W | 0.8271 | likely_pathogenic | 0.845 | pathogenic | -1.333 | Destabilizing | 0.995 | D | 0.741 | deleterious | None | None | None | None | N |
I/Y | 0.6092 | likely_pathogenic | 0.6201 | pathogenic | -1.063 | Destabilizing | 0.946 | D | 0.571 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.