Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30957 | 93094;93095;93096 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
N2AB | 29316 | 88171;88172;88173 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
N2A | 28389 | 85390;85391;85392 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
N2B | 21892 | 65899;65900;65901 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
Novex-1 | 22017 | 66274;66275;66276 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
Novex-2 | 22084 | 66475;66476;66477 | chr2:178548757;178548756;178548755 | chr2:179413484;179413483;179413482 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | None | None | 1.0 | N | 0.681 | 0.364 | 0.406120066682 | gnomAD-4.0.0 | 6.84339E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99465E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.589 | likely_pathogenic | 0.5738 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
A/D | 0.9564 | likely_pathogenic | 0.95 | pathogenic | -1.158 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.498645704 | None | None | N |
A/E | 0.9215 | likely_pathogenic | 0.9124 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
A/F | 0.8285 | likely_pathogenic | 0.8067 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
A/G | 0.3109 | likely_benign | 0.3023 | benign | -1.141 | Destabilizing | 1.0 | D | 0.61 | neutral | D | 0.532462111 | None | None | N |
A/H | 0.9517 | likely_pathogenic | 0.94 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
A/I | 0.3767 | ambiguous | 0.3732 | ambiguous | 0.059 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
A/K | 0.9642 | likely_pathogenic | 0.9581 | pathogenic | -1.012 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
A/L | 0.4658 | ambiguous | 0.4514 | ambiguous | 0.059 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/M | 0.5392 | ambiguous | 0.5147 | ambiguous | -0.009 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
A/N | 0.8888 | likely_pathogenic | 0.8704 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/P | 0.5323 | ambiguous | 0.5364 | ambiguous | -0.178 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.532462111 | None | None | N |
A/Q | 0.9135 | likely_pathogenic | 0.8976 | pathogenic | -0.876 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/R | 0.9356 | likely_pathogenic | 0.9257 | pathogenic | -0.891 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
A/S | 0.2158 | likely_benign | 0.201 | benign | -1.279 | Destabilizing | 1.0 | D | 0.617 | neutral | N | 0.513433633 | None | None | N |
A/T | 0.1922 | likely_benign | 0.18 | benign | -1.112 | Destabilizing | 1.0 | D | 0.762 | deleterious | N | 0.509219892 | None | None | N |
A/V | 0.1578 | likely_benign | 0.1531 | benign | -0.178 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.378198768 | None | None | N |
A/W | 0.9749 | likely_pathogenic | 0.9714 | pathogenic | -1.229 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
A/Y | 0.9309 | likely_pathogenic | 0.9191 | pathogenic | -0.722 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.