Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30962 | 93109;93110;93111 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
N2AB | 29321 | 88186;88187;88188 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
N2A | 28394 | 85405;85406;85407 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
N2B | 21897 | 65914;65915;65916 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
Novex-1 | 22022 | 66289;66290;66291 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
Novex-2 | 22089 | 66490;66491;66492 | chr2:178548742;178548741;178548740 | chr2:179413469;179413468;179413467 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | None | N | 0.157 | 0.06 | 0.0986583533028 | gnomAD-4.0.0 | 6.84261E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99459E-07 | 0 | 0 |
P/S | None | None | 0.166 | N | 0.361 | 0.04 | 0.110078149338 | gnomAD-4.0.0 | 4.10557E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39675E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0728 | likely_benign | 0.0744 | benign | -0.318 | Destabilizing | None | N | 0.157 | neutral | N | 0.375054102 | None | None | N |
P/C | 0.4863 | ambiguous | 0.5077 | ambiguous | -0.677 | Destabilizing | 0.901 | D | 0.435 | neutral | None | None | None | None | N |
P/D | 0.3352 | likely_benign | 0.3352 | benign | -0.123 | Destabilizing | 0.722 | D | 0.438 | neutral | None | None | None | None | N |
P/E | 0.21 | likely_benign | 0.2136 | benign | -0.243 | Destabilizing | 0.561 | D | 0.389 | neutral | None | None | None | None | N |
P/F | 0.4535 | ambiguous | 0.4652 | ambiguous | -0.617 | Destabilizing | 0.901 | D | 0.505 | neutral | None | None | None | None | N |
P/G | 0.2171 | likely_benign | 0.2193 | benign | -0.415 | Destabilizing | 0.209 | N | 0.369 | neutral | None | None | None | None | N |
P/H | 0.2127 | likely_benign | 0.2164 | benign | -0.025 | Destabilizing | 0.965 | D | 0.423 | neutral | None | None | None | None | N |
P/I | 0.2469 | likely_benign | 0.2466 | benign | -0.22 | Destabilizing | 0.007 | N | 0.234 | neutral | None | None | None | None | N |
P/K | 0.2492 | likely_benign | 0.2721 | benign | -0.304 | Destabilizing | 0.561 | D | 0.388 | neutral | None | None | None | None | N |
P/L | 0.1118 | likely_benign | 0.1123 | benign | -0.22 | Destabilizing | 0.08 | N | 0.361 | neutral | N | 0.426386999 | None | None | N |
P/M | 0.2157 | likely_benign | 0.2198 | benign | -0.356 | Destabilizing | 0.901 | D | 0.435 | neutral | None | None | None | None | N |
P/N | 0.2294 | likely_benign | 0.2323 | benign | -0.095 | Destabilizing | 0.722 | D | 0.493 | neutral | None | None | None | None | N |
P/Q | 0.1403 | likely_benign | 0.1457 | benign | -0.324 | Destabilizing | 0.873 | D | 0.437 | neutral | N | 0.416439364 | None | None | N |
P/R | 0.222 | likely_benign | 0.2357 | benign | 0.162 | Stabilizing | 0.662 | D | 0.491 | neutral | N | 0.448589068 | None | None | N |
P/S | 0.1156 | likely_benign | 0.1161 | benign | -0.445 | Destabilizing | 0.166 | N | 0.361 | neutral | N | 0.39706417 | None | None | N |
P/T | 0.0879 | likely_benign | 0.0869 | benign | -0.466 | Destabilizing | 0.005 | N | 0.181 | neutral | N | 0.459710139 | None | None | N |
P/V | 0.1639 | likely_benign | 0.1669 | benign | -0.22 | Destabilizing | 0.007 | N | 0.179 | neutral | None | None | None | None | N |
P/W | 0.6275 | likely_pathogenic | 0.6358 | pathogenic | -0.69 | Destabilizing | 0.991 | D | 0.43 | neutral | None | None | None | None | N |
P/Y | 0.4206 | ambiguous | 0.424 | ambiguous | -0.386 | Destabilizing | 0.965 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.