Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30980 | 93163;93164;93165 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
N2AB | 29339 | 88240;88241;88242 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
N2A | 28412 | 85459;85460;85461 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
N2B | 21915 | 65968;65969;65970 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
Novex-1 | 22040 | 66343;66344;66345 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
Novex-2 | 22107 | 66544;66545;66546 | chr2:178548688;178548687;178548686 | chr2:179413415;179413414;179413413 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.994 | N | 0.564 | 0.432 | 0.531922418639 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1157 | likely_benign | 0.1092 | benign | -1.295 | Destabilizing | 0.911 | D | 0.489 | neutral | D | 0.535217202 | None | None | I |
T/C | 0.436 | ambiguous | 0.4173 | ambiguous | -0.848 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
T/D | 0.7518 | likely_pathogenic | 0.7219 | pathogenic | -2.006 | Highly Destabilizing | 0.996 | D | 0.647 | neutral | None | None | None | None | I |
T/E | 0.5475 | ambiguous | 0.5242 | ambiguous | -1.721 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | I |
T/F | 0.3406 | ambiguous | 0.3235 | benign | -0.741 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | I |
T/G | 0.4732 | ambiguous | 0.439 | ambiguous | -1.744 | Destabilizing | 0.985 | D | 0.645 | neutral | None | None | None | None | I |
T/H | 0.3773 | ambiguous | 0.3495 | ambiguous | -1.693 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/I | 0.2207 | likely_benign | 0.2222 | benign | -0.071 | Destabilizing | 0.606 | D | 0.37 | neutral | N | 0.505819802 | None | None | I |
T/K | 0.4787 | ambiguous | 0.4492 | ambiguous | -0.34 | Destabilizing | 0.996 | D | 0.642 | neutral | None | None | None | None | I |
T/L | 0.1255 | likely_benign | 0.1202 | benign | -0.071 | Destabilizing | 0.931 | D | 0.545 | neutral | None | None | None | None | I |
T/M | 0.0917 | likely_benign | 0.0906 | benign | -0.302 | Destabilizing | 0.998 | D | 0.672 | neutral | None | None | None | None | I |
T/N | 0.2712 | likely_benign | 0.2591 | benign | -1.328 | Destabilizing | 0.994 | D | 0.564 | neutral | N | 0.49146059 | None | None | I |
T/P | 0.8249 | likely_pathogenic | 0.8061 | pathogenic | -0.453 | Destabilizing | 0.997 | D | 0.678 | prob.neutral | D | 0.524150381 | None | None | I |
T/Q | 0.3648 | ambiguous | 0.3401 | ambiguous | -0.871 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | I |
T/R | 0.3758 | ambiguous | 0.347 | ambiguous | -0.833 | Destabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | I |
T/S | 0.152 | likely_benign | 0.1421 | benign | -1.513 | Destabilizing | 0.659 | D | 0.396 | neutral | N | 0.484556308 | None | None | I |
T/V | 0.1613 | likely_benign | 0.1628 | benign | -0.453 | Destabilizing | 0.469 | N | 0.392 | neutral | None | None | None | None | I |
T/W | 0.7283 | likely_pathogenic | 0.7203 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
T/Y | 0.3504 | ambiguous | 0.3394 | benign | -0.639 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.