Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30997 | 93214;93215;93216 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
N2AB | 29356 | 88291;88292;88293 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
N2A | 28429 | 85510;85511;85512 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
N2B | 21932 | 66019;66020;66021 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
Novex-1 | 22057 | 66394;66395;66396 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
Novex-2 | 22124 | 66595;66596;66597 | chr2:178548637;178548636;178548635 | chr2:179413364;179413363;179413362 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs981213729 | -0.298 | 0.782 | D | 0.734 | 0.315 | 0.491387584038 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/I | rs981213729 | -0.298 | 0.782 | D | 0.734 | 0.315 | 0.491387584038 | gnomAD-4.0.0 | 6.15764E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29613E-06 | 2.31863E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.086 | likely_benign | 0.0891 | benign | -0.843 | Destabilizing | 0.174 | N | 0.515 | neutral | N | 0.509761747 | None | None | N |
T/C | 0.3023 | likely_benign | 0.3035 | benign | -0.767 | Destabilizing | 0.973 | D | 0.719 | prob.delet. | None | None | None | None | N |
T/D | 0.465 | ambiguous | 0.481 | ambiguous | -0.849 | Destabilizing | 0.575 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/E | 0.311 | likely_benign | 0.34 | ambiguous | -0.843 | Destabilizing | 0.404 | N | 0.698 | prob.neutral | None | None | None | None | N |
T/F | 0.2031 | likely_benign | 0.2121 | benign | -1.072 | Destabilizing | 0.906 | D | 0.793 | deleterious | None | None | None | None | N |
T/G | 0.2933 | likely_benign | 0.3053 | benign | -1.073 | Destabilizing | 0.404 | N | 0.687 | prob.neutral | None | None | None | None | N |
T/H | 0.1704 | likely_benign | 0.1809 | benign | -1.435 | Destabilizing | 0.973 | D | 0.776 | deleterious | None | None | None | None | N |
T/I | 0.1301 | likely_benign | 0.1382 | benign | -0.321 | Destabilizing | 0.782 | D | 0.734 | prob.delet. | D | 0.532347468 | None | None | N |
T/K | 0.1604 | likely_benign | 0.1764 | benign | -0.68 | Destabilizing | 0.404 | N | 0.697 | prob.neutral | None | None | None | None | N |
T/L | 0.0934 | likely_benign | 0.0968 | benign | -0.321 | Destabilizing | 0.575 | D | 0.667 | neutral | None | None | None | None | N |
T/M | 0.0802 | likely_benign | 0.0804 | benign | 0.002 | Stabilizing | 0.991 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/N | 0.145 | likely_benign | 0.1529 | benign | -0.753 | Destabilizing | 0.338 | N | 0.625 | neutral | N | 0.501621446 | None | None | N |
T/P | 0.7535 | likely_pathogenic | 0.78 | pathogenic | -0.465 | Destabilizing | 0.879 | D | 0.732 | prob.delet. | D | 0.529386939 | None | None | N |
T/Q | 0.1805 | likely_benign | 0.188 | benign | -1.029 | Destabilizing | 0.826 | D | 0.763 | deleterious | None | None | None | None | N |
T/R | 0.1329 | likely_benign | 0.1465 | benign | -0.429 | Destabilizing | 0.826 | D | 0.751 | deleterious | None | None | None | None | N |
T/S | 0.1109 | likely_benign | 0.1141 | benign | -0.967 | Destabilizing | 0.001 | N | 0.323 | neutral | N | 0.516647297 | None | None | N |
T/V | 0.1179 | likely_benign | 0.1222 | benign | -0.465 | Destabilizing | 0.575 | D | 0.599 | neutral | None | None | None | None | N |
T/W | 0.4896 | ambiguous | 0.5198 | ambiguous | -1.002 | Destabilizing | 0.991 | D | 0.779 | deleterious | None | None | None | None | N |
T/Y | 0.2357 | likely_benign | 0.2555 | benign | -0.715 | Destabilizing | 0.906 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.