Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3100 | 9523;9524;9525 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
N2AB | 3100 | 9523;9524;9525 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
N2A | 3100 | 9523;9524;9525 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
N2B | 3054 | 9385;9386;9387 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
Novex-1 | 3054 | 9385;9386;9387 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
Novex-2 | 3054 | 9385;9386;9387 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
Novex-3 | 3100 | 9523;9524;9525 | chr2:178768021;178768020;178768019 | chr2:179632748;179632747;179632746 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs780950679 | 0.089 | None | N | 0.203 | 0.039 | 0.0401082797425 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.81E-06 | 0 |
T/I | rs780950679 | 0.089 | None | N | 0.203 | 0.039 | 0.0401082797425 | gnomAD-4.0.0 | 3.1811E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 1.43271E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0736 | likely_benign | 0.0712 | benign | -0.21 | Destabilizing | None | N | 0.105 | neutral | N | 0.34079072 | None | None | N |
T/C | 0.4157 | ambiguous | 0.3843 | ambiguous | -0.363 | Destabilizing | 0.245 | N | 0.327 | neutral | None | None | None | None | N |
T/D | 0.2568 | likely_benign | 0.2529 | benign | 0.298 | Stabilizing | 0.009 | N | 0.349 | neutral | None | None | None | None | N |
T/E | 0.2395 | likely_benign | 0.2275 | benign | 0.241 | Stabilizing | None | N | 0.146 | neutral | None | None | None | None | N |
T/F | 0.2235 | likely_benign | 0.2421 | benign | -0.673 | Destabilizing | 0.044 | N | 0.502 | neutral | None | None | None | None | N |
T/G | 0.1531 | likely_benign | 0.1477 | benign | -0.352 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
T/H | 0.2619 | likely_benign | 0.2554 | benign | -0.588 | Destabilizing | 0.245 | N | 0.409 | neutral | None | None | None | None | N |
T/I | 0.1303 | likely_benign | 0.1403 | benign | 0.044 | Stabilizing | None | N | 0.203 | neutral | N | 0.34719777 | None | None | N |
T/K | 0.2106 | likely_benign | 0.2246 | benign | -0.314 | Destabilizing | 0.007 | N | 0.354 | neutral | N | 0.333970582 | None | None | N |
T/L | 0.1036 | likely_benign | 0.1059 | benign | 0.044 | Stabilizing | 0.004 | N | 0.291 | neutral | None | None | None | None | N |
T/M | 0.0891 | likely_benign | 0.0917 | benign | -0.049 | Destabilizing | 0.138 | N | 0.339 | neutral | None | None | None | None | N |
T/N | 0.0962 | likely_benign | 0.0985 | benign | -0.21 | Destabilizing | 0.044 | N | 0.237 | neutral | None | None | None | None | N |
T/P | 0.1485 | likely_benign | 0.16 | benign | -0.011 | Destabilizing | None | N | 0.201 | neutral | N | 0.34034036 | None | None | N |
T/Q | 0.2183 | likely_benign | 0.209 | benign | -0.352 | Destabilizing | 0.022 | N | 0.419 | neutral | None | None | None | None | N |
T/R | 0.1813 | likely_benign | 0.1988 | benign | -0.09 | Destabilizing | 0.033 | N | 0.417 | neutral | N | 0.337957463 | None | None | N |
T/S | 0.0874 | likely_benign | 0.0839 | benign | -0.402 | Destabilizing | 0.001 | N | 0.143 | neutral | N | 0.292398468 | None | None | N |
T/V | 0.0996 | likely_benign | 0.1029 | benign | -0.011 | Destabilizing | None | N | 0.088 | neutral | None | None | None | None | N |
T/W | 0.5708 | likely_pathogenic | 0.5663 | pathogenic | -0.736 | Destabilizing | 0.788 | D | 0.398 | neutral | None | None | None | None | N |
T/Y | 0.3269 | likely_benign | 0.3303 | benign | -0.42 | Destabilizing | 0.245 | N | 0.496 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.