Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31026 | 93301;93302;93303 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
N2AB | 29385 | 88378;88379;88380 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
N2A | 28458 | 85597;85598;85599 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
N2B | 21961 | 66106;66107;66108 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
Novex-1 | 22086 | 66481;66482;66483 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
Novex-2 | 22153 | 66682;66683;66684 | chr2:178548550;178548549;178548548 | chr2:179413277;179413276;179413275 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs759887010 | 0.572 | 0.939 | N | 0.441 | 0.251 | 0.277730125212 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
K/E | rs759887010 | 0.572 | 0.939 | N | 0.441 | 0.251 | 0.277730125212 | gnomAD-4.0.0 | 1.59113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77269E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1698120195 | None | 0.046 | N | 0.195 | 0.128 | 0.270447802918 | gnomAD-4.0.0 | 2.05255E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69836E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9108 | likely_pathogenic | 0.8148 | pathogenic | 0.059 | Stabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | N |
K/C | 0.9337 | likely_pathogenic | 0.8915 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
K/D | 0.9758 | likely_pathogenic | 0.9424 | pathogenic | -0.109 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | N |
K/E | 0.8448 | likely_pathogenic | 0.6801 | pathogenic | -0.11 | Destabilizing | 0.939 | D | 0.441 | neutral | N | 0.51315034 | None | None | N |
K/F | 0.9867 | likely_pathogenic | 0.9705 | pathogenic | -0.203 | Destabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
K/G | 0.9275 | likely_pathogenic | 0.8552 | pathogenic | -0.113 | Destabilizing | 0.993 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/H | 0.6923 | likely_pathogenic | 0.5754 | pathogenic | -0.299 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/I | 0.9125 | likely_pathogenic | 0.8118 | pathogenic | 0.427 | Stabilizing | 0.991 | D | 0.807 | deleterious | N | 0.467747934 | None | None | N |
K/L | 0.8537 | likely_pathogenic | 0.7541 | pathogenic | 0.427 | Stabilizing | 0.986 | D | 0.703 | prob.neutral | None | None | None | None | N |
K/M | 0.7955 | likely_pathogenic | 0.6563 | pathogenic | 0.12 | Stabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | N |
K/N | 0.9463 | likely_pathogenic | 0.8888 | pathogenic | 0.176 | Stabilizing | 0.982 | D | 0.607 | neutral | N | 0.49098075 | None | None | N |
K/P | 0.987 | likely_pathogenic | 0.9725 | pathogenic | 0.331 | Stabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
K/Q | 0.504 | ambiguous | 0.3669 | ambiguous | 0.015 | Stabilizing | 0.982 | D | 0.591 | neutral | N | 0.513190412 | None | None | N |
K/R | 0.1053 | likely_benign | 0.0933 | benign | -0.009 | Destabilizing | 0.046 | N | 0.195 | neutral | N | 0.506571084 | None | None | N |
K/S | 0.9034 | likely_pathogenic | 0.8207 | pathogenic | -0.243 | Destabilizing | 0.953 | D | 0.549 | neutral | None | None | None | None | N |
K/T | 0.6849 | likely_pathogenic | 0.5204 | ambiguous | -0.108 | Destabilizing | 0.991 | D | 0.721 | prob.delet. | N | 0.454659397 | None | None | N |
K/V | 0.8652 | likely_pathogenic | 0.7524 | pathogenic | 0.331 | Stabilizing | 0.993 | D | 0.77 | deleterious | None | None | None | None | N |
K/W | 0.9569 | likely_pathogenic | 0.9285 | pathogenic | -0.264 | Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
K/Y | 0.9563 | likely_pathogenic | 0.9189 | pathogenic | 0.096 | Stabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.