Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3103 | 9532;9533;9534 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
N2AB | 3103 | 9532;9533;9534 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
N2A | 3103 | 9532;9533;9534 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
N2B | 3057 | 9394;9395;9396 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
Novex-1 | 3057 | 9394;9395;9396 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
Novex-2 | 3057 | 9394;9395;9396 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
Novex-3 | 3103 | 9532;9533;9534 | chr2:178767923;178767922;178767921 | chr2:179632650;179632649;179632648 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs2090782630 | None | None | N | 0.178 | 0.11 | 0.411001663086 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs2090782630 | None | None | N | 0.178 | 0.11 | 0.411001663086 | gnomAD-4.0.0 | 6.57099E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46998E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.6065 | likely_pathogenic | 0.6858 | pathogenic | -2.232 | Highly Destabilizing | 0.055 | N | 0.446 | neutral | None | None | None | None | N |
I/C | 0.6944 | likely_pathogenic | 0.7217 | pathogenic | -1.571 | Destabilizing | 0.859 | D | 0.599 | neutral | None | None | None | None | N |
I/D | 0.9092 | likely_pathogenic | 0.9452 | pathogenic | -2.159 | Highly Destabilizing | 0.667 | D | 0.653 | neutral | None | None | None | None | N |
I/E | 0.7877 | likely_pathogenic | 0.8646 | pathogenic | -1.995 | Destabilizing | 0.364 | N | 0.637 | neutral | None | None | None | None | N |
I/F | 0.1338 | likely_benign | 0.1503 | benign | -1.282 | Destabilizing | 0.22 | N | 0.601 | neutral | None | None | None | None | N |
I/G | 0.81 | likely_pathogenic | 0.8562 | pathogenic | -2.726 | Highly Destabilizing | 0.22 | N | 0.633 | neutral | None | None | None | None | N |
I/H | 0.6685 | likely_pathogenic | 0.7226 | pathogenic | -2.063 | Highly Destabilizing | 0.958 | D | 0.619 | neutral | None | None | None | None | N |
I/K | 0.6337 | likely_pathogenic | 0.7674 | pathogenic | -1.886 | Destabilizing | 0.175 | N | 0.631 | neutral | D | 0.564571131 | None | None | N |
I/L | 0.0871 | likely_benign | 0.1052 | benign | -0.851 | Destabilizing | None | N | 0.19 | neutral | N | 0.501106713 | None | None | N |
I/M | 0.0732 | likely_benign | 0.0848 | benign | -0.745 | Destabilizing | 0.003 | N | 0.227 | neutral | N | 0.501190943 | None | None | N |
I/N | 0.4949 | ambiguous | 0.5815 | pathogenic | -2.046 | Highly Destabilizing | 0.667 | D | 0.648 | neutral | None | None | None | None | N |
I/P | 0.9346 | likely_pathogenic | 0.9499 | pathogenic | -1.286 | Destabilizing | 0.859 | D | 0.647 | neutral | None | None | None | None | N |
I/Q | 0.6136 | likely_pathogenic | 0.7093 | pathogenic | -1.986 | Destabilizing | 0.497 | N | 0.633 | neutral | None | None | None | None | N |
I/R | 0.5409 | ambiguous | 0.6661 | pathogenic | -1.479 | Destabilizing | 0.427 | N | 0.647 | neutral | N | 0.516666753 | None | None | N |
I/S | 0.5624 | ambiguous | 0.6517 | pathogenic | -2.741 | Highly Destabilizing | 0.124 | N | 0.585 | neutral | None | None | None | None | N |
I/T | 0.5027 | ambiguous | 0.5676 | pathogenic | -2.437 | Highly Destabilizing | 0.001 | N | 0.31 | neutral | N | 0.513844628 | None | None | N |
I/V | 0.0943 | likely_benign | 0.0944 | benign | -1.286 | Destabilizing | None | N | 0.178 | neutral | N | 0.462047758 | None | None | N |
I/W | 0.6726 | likely_pathogenic | 0.7261 | pathogenic | -1.59 | Destabilizing | 0.958 | D | 0.626 | neutral | None | None | None | None | N |
I/Y | 0.3874 | ambiguous | 0.4582 | ambiguous | -1.31 | Destabilizing | 0.667 | D | 0.613 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.