Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3104 | 9535;9536;9537 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
N2AB | 3104 | 9535;9536;9537 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
N2A | 3104 | 9535;9536;9537 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
N2B | 3058 | 9397;9398;9399 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
Novex-1 | 3058 | 9397;9398;9399 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
Novex-2 | 3058 | 9397;9398;9399 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
Novex-3 | 3104 | 9535;9536;9537 | chr2:178767920;178767919;178767918 | chr2:179632647;179632646;179632645 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2154341451 | None | 0.042 | N | 0.313 | 0.269 | 0.29385284311 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5694 | likely_pathogenic | 0.7051 | pathogenic | -0.408 | Destabilizing | 0.055 | N | 0.327 | neutral | None | None | None | None | N |
K/C | 0.8202 | likely_pathogenic | 0.8852 | pathogenic | -0.548 | Destabilizing | 0.883 | D | 0.418 | neutral | None | None | None | None | N |
K/D | 0.838 | likely_pathogenic | 0.9034 | pathogenic | -0.078 | Destabilizing | 0.22 | N | 0.339 | neutral | None | None | None | None | N |
K/E | 0.4139 | ambiguous | 0.5595 | ambiguous | 0.056 | Stabilizing | 0.042 | N | 0.313 | neutral | N | 0.500467494 | None | None | N |
K/F | 0.8783 | likely_pathogenic | 0.9333 | pathogenic | 0.008 | Stabilizing | 0.497 | N | 0.445 | neutral | None | None | None | None | N |
K/G | 0.7466 | likely_pathogenic | 0.8391 | pathogenic | -0.789 | Destabilizing | 0.22 | N | 0.393 | neutral | None | None | None | None | N |
K/H | 0.384 | ambiguous | 0.4696 | ambiguous | -1.033 | Destabilizing | 0.667 | D | 0.399 | neutral | None | None | None | None | N |
K/I | 0.4607 | ambiguous | 0.6173 | pathogenic | 0.58 | Stabilizing | 0.331 | N | 0.445 | neutral | None | None | None | None | N |
K/L | 0.5291 | ambiguous | 0.6519 | pathogenic | 0.58 | Stabilizing | 0.02 | N | 0.34 | neutral | None | None | None | None | N |
K/M | 0.3526 | ambiguous | 0.494 | ambiguous | 0.21 | Stabilizing | 0.019 | N | 0.252 | neutral | D | 0.577886743 | None | None | N |
K/N | 0.6169 | likely_pathogenic | 0.7461 | pathogenic | -0.503 | Destabilizing | 0.175 | N | 0.267 | neutral | N | 0.512062491 | None | None | N |
K/P | 0.9566 | likely_pathogenic | 0.9733 | pathogenic | 0.281 | Stabilizing | 0.364 | N | 0.415 | neutral | None | None | None | None | N |
K/Q | 0.1838 | likely_benign | 0.2407 | benign | -0.454 | Destabilizing | 0.008 | N | 0.195 | neutral | N | 0.503046775 | None | None | N |
K/R | 0.096 | likely_benign | 0.1046 | benign | -0.603 | Destabilizing | None | N | 0.103 | neutral | N | 0.468360683 | None | None | N |
K/S | 0.5949 | likely_pathogenic | 0.7328 | pathogenic | -1.08 | Destabilizing | 0.011 | N | 0.143 | neutral | None | None | None | None | N |
K/T | 0.2253 | likely_benign | 0.3503 | ambiguous | -0.733 | Destabilizing | 0.001 | N | 0.19 | neutral | N | 0.51361781 | None | None | N |
K/V | 0.4319 | ambiguous | 0.5712 | pathogenic | 0.281 | Stabilizing | 0.124 | N | 0.387 | neutral | None | None | None | None | N |
K/W | 0.8602 | likely_pathogenic | 0.9149 | pathogenic | 0.057 | Stabilizing | 0.958 | D | 0.438 | neutral | None | None | None | None | N |
K/Y | 0.7857 | likely_pathogenic | 0.8654 | pathogenic | 0.349 | Stabilizing | 0.667 | D | 0.427 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.