Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 31041 | 93346;93347;93348 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
N2AB | 29400 | 88423;88424;88425 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
N2A | 28473 | 85642;85643;85644 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
N2B | 21976 | 66151;66152;66153 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
Novex-1 | 22101 | 66526;66527;66528 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
Novex-2 | 22168 | 66727;66728;66729 | chr2:178548505;178548504;178548503 | chr2:179413232;179413231;179413230 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.055 | N | 0.277 | 0.153 | 0.28492961333 | gnomAD-4.0.0 | 6.84176E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.51915E-05 | None | 0 | 0 | 0 | 0 | 0 |
L/I | rs1698098552 | None | None | N | 0.086 | 0.079 | 0.180583059064 | gnomAD-4.0.0 | 6.84176E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99442E-07 | 0 | 0 |
L/V | None | None | None | N | 0.105 | 0.08 | 0.20549828249 | gnomAD-4.0.0 | 6.84176E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99442E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1399 | likely_benign | 0.1403 | benign | -0.499 | Destabilizing | 0.007 | N | 0.206 | neutral | None | None | None | None | I |
L/C | 0.4466 | ambiguous | 0.4466 | ambiguous | -0.853 | Destabilizing | 0.628 | D | 0.25 | neutral | None | None | None | None | I |
L/D | 0.4695 | ambiguous | 0.4613 | ambiguous | -0.344 | Destabilizing | 0.038 | N | 0.317 | neutral | None | None | None | None | I |
L/E | 0.2656 | likely_benign | 0.2529 | benign | -0.433 | Destabilizing | 0.001 | N | 0.213 | neutral | None | None | None | None | I |
L/F | 0.1344 | likely_benign | 0.1382 | benign | -0.664 | Destabilizing | 0.055 | N | 0.277 | neutral | N | 0.504018896 | None | None | I |
L/G | 0.3479 | ambiguous | 0.3425 | ambiguous | -0.589 | Destabilizing | 0.031 | N | 0.273 | neutral | None | None | None | None | I |
L/H | 0.2063 | likely_benign | 0.2034 | benign | 0.073 | Stabilizing | 0.295 | N | 0.241 | neutral | N | 0.498195999 | None | None | I |
L/I | 0.0683 | likely_benign | 0.0761 | benign | -0.377 | Destabilizing | None | N | 0.086 | neutral | N | 0.492641782 | None | None | I |
L/K | 0.2424 | likely_benign | 0.2342 | benign | -0.404 | Destabilizing | 0.016 | N | 0.236 | neutral | None | None | None | None | I |
L/M | 0.0969 | likely_benign | 0.1032 | benign | -0.699 | Destabilizing | 0.214 | N | 0.286 | neutral | None | None | None | None | I |
L/N | 0.2108 | likely_benign | 0.2133 | benign | -0.298 | Destabilizing | 0.072 | N | 0.367 | neutral | None | None | None | None | I |
L/P | 0.2045 | likely_benign | 0.2028 | benign | -0.392 | Destabilizing | 0.106 | N | 0.335 | neutral | N | 0.464074176 | None | None | I |
L/Q | 0.1321 | likely_benign | 0.1246 | benign | -0.471 | Destabilizing | 0.072 | N | 0.343 | neutral | None | None | None | None | I |
L/R | 0.206 | likely_benign | 0.1948 | benign | 0.061 | Stabilizing | None | N | 0.211 | neutral | N | 0.51622793 | None | None | I |
L/S | 0.1633 | likely_benign | 0.1616 | benign | -0.657 | Destabilizing | 0.001 | N | 0.133 | neutral | None | None | None | None | I |
L/T | 0.1432 | likely_benign | 0.1437 | benign | -0.65 | Destabilizing | None | N | 0.16 | neutral | None | None | None | None | I |
L/V | 0.0715 | likely_benign | 0.078 | benign | -0.392 | Destabilizing | None | N | 0.105 | neutral | N | 0.4797312 | None | None | I |
L/W | 0.3059 | likely_benign | 0.299 | benign | -0.675 | Destabilizing | 0.864 | D | 0.236 | neutral | None | None | None | None | I |
L/Y | 0.2993 | likely_benign | 0.2886 | benign | -0.456 | Destabilizing | 0.356 | N | 0.298 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.