Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3104193346;93347;93348 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
N2AB2940088423;88424;88425 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
N2A2847385642;85643;85644 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
N2B2197666151;66152;66153 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
Novex-12210166526;66527;66528 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
Novex-22216866727;66728;66729 chr2:178548505;178548504;178548503chr2:179413232;179413231;179413230
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-114
  • Domain position: 26
  • Structural Position: 28
  • Q(SASA): 1.1557
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None 0.055 N 0.277 0.153 0.28492961333 gnomAD-4.0.0 6.84176E-07 None None None None I None 0 0 None 0 2.51915E-05 None 0 0 0 0 0
L/I rs1698098552 None None N 0.086 0.079 0.180583059064 gnomAD-4.0.0 6.84176E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99442E-07 0 0
L/V None None None N 0.105 0.08 0.20549828249 gnomAD-4.0.0 6.84176E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99442E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1399 likely_benign 0.1403 benign -0.499 Destabilizing 0.007 N 0.206 neutral None None None None I
L/C 0.4466 ambiguous 0.4466 ambiguous -0.853 Destabilizing 0.628 D 0.25 neutral None None None None I
L/D 0.4695 ambiguous 0.4613 ambiguous -0.344 Destabilizing 0.038 N 0.317 neutral None None None None I
L/E 0.2656 likely_benign 0.2529 benign -0.433 Destabilizing 0.001 N 0.213 neutral None None None None I
L/F 0.1344 likely_benign 0.1382 benign -0.664 Destabilizing 0.055 N 0.277 neutral N 0.504018896 None None I
L/G 0.3479 ambiguous 0.3425 ambiguous -0.589 Destabilizing 0.031 N 0.273 neutral None None None None I
L/H 0.2063 likely_benign 0.2034 benign 0.073 Stabilizing 0.295 N 0.241 neutral N 0.498195999 None None I
L/I 0.0683 likely_benign 0.0761 benign -0.377 Destabilizing None N 0.086 neutral N 0.492641782 None None I
L/K 0.2424 likely_benign 0.2342 benign -0.404 Destabilizing 0.016 N 0.236 neutral None None None None I
L/M 0.0969 likely_benign 0.1032 benign -0.699 Destabilizing 0.214 N 0.286 neutral None None None None I
L/N 0.2108 likely_benign 0.2133 benign -0.298 Destabilizing 0.072 N 0.367 neutral None None None None I
L/P 0.2045 likely_benign 0.2028 benign -0.392 Destabilizing 0.106 N 0.335 neutral N 0.464074176 None None I
L/Q 0.1321 likely_benign 0.1246 benign -0.471 Destabilizing 0.072 N 0.343 neutral None None None None I
L/R 0.206 likely_benign 0.1948 benign 0.061 Stabilizing None N 0.211 neutral N 0.51622793 None None I
L/S 0.1633 likely_benign 0.1616 benign -0.657 Destabilizing 0.001 N 0.133 neutral None None None None I
L/T 0.1432 likely_benign 0.1437 benign -0.65 Destabilizing None N 0.16 neutral None None None None I
L/V 0.0715 likely_benign 0.078 benign -0.392 Destabilizing None N 0.105 neutral N 0.4797312 None None I
L/W 0.3059 likely_benign 0.299 benign -0.675 Destabilizing 0.864 D 0.236 neutral None None None None I
L/Y 0.2993 likely_benign 0.2886 benign -0.456 Destabilizing 0.356 N 0.298 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.